Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1986 132 3e-26 seq2206 113 3e-20 >seq1986 Length=559288 Score = 132 bits (146), Expect = 3e-26 Identities = 160/217 (74%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||| |||||||||||||| |||||||||||| | || |||| Sbjct 253653 AGGACAAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCCGATAGGGTACGACCATCC 253712 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||| || || |||| |||||| ||||| |||| | || |||||||| Sbjct 253713 TCAAGCTGCTTTCCAGCAAAAATCAATCGTTGTTGGTCGGGCGGGATGCCTTCCTTGTCC 253772 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| | ||||||| ||| | |||||| || | || || Sbjct 253773 TGGATCTTGGCCTTGAC----GTTATCGATGGTGTCAGGCGACTCGACCTCGAGAGTGAT 253828 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||||| || ||||||||||| || || || |||||| Sbjct 253829 GGTCTTGCCAGTGAGGGTCTTGACGAAAATTTGCATG 253865 Score = 111 bits (122), Expect = 1e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||||| || ||||||||| ||||| || || || ||| | || |||| || || Sbjct 253431 AGGTGAAGAGTTGACTCCTTCTGGATGTTGTAATCGGAGAGGGTACGACCATCTTCGAGC 253490 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 |||||||| ||||| || || ||||||||||| | || | ||||||||||| | || Sbjct 253491 TGCTTTCCAGCGAAAATAAGACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATC 253550 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || || ||| | || | || | |||||| |||| || ||||||||||| Sbjct 253551 TTGGCCTTTACGTTGTCGATAGTATCCGACGACTCGACCTCAAGTGTAATGGTCTTTCCG 253610 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||||| |||||||||||||| Sbjct 253611 GTCAAAGTCTTCACAAAGATCTGCAT 253636 Score = 98.7 bits (108), Expect = 6e-16 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||||| || ||||||||| ||||| || ||||| || |||| |||| |||| Sbjct 252928 AGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCCAAC 252987 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 |||||||| || ||||||| || || || || | || | || |||||||| | || Sbjct 252988 TGCTTTCCAGCAAAGATCAAACGCTGTTGATCAGGGGGTATGCCTTCCTTGTCCTGGATC 253047 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || |||||| | || | || | ||| || |||| || ||||||||||| Sbjct 253048 TTGGCCTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCAAGAGTAATGGTCTTTCCG 253107 Query 34952 GTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| ||||| ||||| || |||||| Sbjct 253108 GTGAGCGTCTTGACAAAAATTTGCATG 253134 >seq2206 Length=69542 Score = 113 bits (124), Expect = 3e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||||||||| || || | ||| |||| || || ||||| |||||||| Sbjct 41089 CTCCTTCTGAATGTTATAGTCGGAAAGAGTACGCCCATCTTCGAGCTGCTTCCCGGCGAA 41148 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 || || || || ||||| | || | || |||||||| | || ||| || ||| Sbjct 41149 AATGAGACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCCTGAATCTTTGCCTTCACGTT 41208 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | |||||| || | ||| || ||||| |||||||||||||| || Sbjct 41209 GTCAATGGTGTCGGACGACTCGACCTCCAGGGTAATCGTCTTACCCGTGAGGGTCTTGAC 41268 Query 34966 AAAGATCTGCAT 34977 ||||| ||||| Sbjct 41269 GAAGATTTGCAT 41280 Score = 87.8 bits (96), Expect = 1e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||| ||||||||||||||| ||||| || || | || |||| Sbjct 41525 AGGACGAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCT 41584 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 ||||||||||| || |||||||||| || || ||||| Sbjct 41585 TCCAGTTGCTTCCCCGCGAAGATCAAGCGCTGTTGGTC 41622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325682650292783