Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15]
2,557 sequences; 57,384,356 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq1986 132 3e-26
seq2206 113 3e-20
>seq1986
Length=559288
Score = 132 bits (146), Expect = 3e-26
Identities = 160/217 (74%), Gaps = 8/217 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| ||| |||||||||||||| |||||||||||| | || ||||
Sbjct 253653 AGGACAAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCCGATAGGGTACGACCATCC 253712
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || |||||||| || || |||| |||||| ||||| |||| | || ||||||||
Sbjct 253713 TCAAGCTGCTTTCCAGCAAAAATCAATCGTTGTTGGTCGGGCGGGATGCCTTCCTTGTCC 253772
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || ||||| | ||||||| ||| | |||||| || | || ||
Sbjct 253773 TGGATCTTGGCCTTGAC----GTTATCGATGGTGTCAGGCGACTCGACCTCGAGAGTGAT 253828
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|||||| || ||||||||||| || || || ||||||
Sbjct 253829 GGTCTTGCCAGTGAGGGTCTTGACGAAAATTTGCATG 253865
Score = 111 bits (122), Expect = 1e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831
||||||| || ||||||||| ||||| || || || ||| | || |||| || ||
Sbjct 253431 AGGTGAAGAGTTGACTCCTTCTGGATGTTGTAATCGGAGAGGGTACGACCATCTTCGAGC 253490
Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891
|||||||| ||||| || || ||||||||||| | || | ||||||||||| | ||
Sbjct 253491 TGCTTTCCAGCGAAAATAAGACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATC 253550
Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951
|| || ||| | || | || | |||||| |||| || |||||||||||
Sbjct 253551 TTGGCCTTTACGTTGTCGATAGTATCCGACGACTCGACCTCAAGTGTAATGGTCTTTCCG 253610
Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | ||||| ||||||||||||||
Sbjct 253611 GTCAAAGTCTTCACAAAGATCTGCAT 253636
Score = 98.7 bits (108), Expect = 6e-16
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831
||||||| || ||||||||| ||||| || ||||| || |||| |||| ||||
Sbjct 252928 AGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCCAAC 252987
Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891
|||||||| || ||||||| || || || || | || | || |||||||| | ||
Sbjct 252988 TGCTTTCCAGCAAAGATCAAACGCTGTTGATCAGGGGGTATGCCTTCCTTGTCCTGGATC 253047
Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951
|| |||||| | || | || | ||| || |||| || |||||||||||
Sbjct 253048 TTGGCCTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCAAGAGTAATGGTCTTTCCG 253107
Query 34952 GTGAGGGTCTTTACAAAGATCTGCATG 34978
||||| ||||| ||||| || ||||||
Sbjct 253108 GTGAGCGTCTTGACAAAAATTTGCATG 253134
>seq2206
Length=69542
Score = 113 bits (124), Expect = 3e-20
Identities = 140/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||||||||||||||| || || | ||| |||| || || ||||| ||||||||
Sbjct 41089 CTCCTTCTGAATGTTATAGTCGGAAAGAGTACGCCCATCTTCGAGCTGCTTCCCGGCGAA 41148
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|| || || || ||||| | || | || |||||||| | || ||| || |||
Sbjct 41149 AATGAGACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCCTGAATCTTTGCCTTCACGTT 41208
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| || | || | |||||| || | ||| || ||||| |||||||||||||| ||
Sbjct 41209 GTCAATGGTGTCGGACGACTCGACCTCCAGGGTAATCGTCTTACCCGTGAGGGTCTTGAC 41268
Query 34966 AAAGATCTGCAT 34977
||||| |||||
Sbjct 41269 GAAGATTTGCAT 41280
Score = 87.8 bits (96), Expect = 1e-12
Identities = 78/98 (80%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| ||| ||||||||||||||| ||||| || || | || ||||
Sbjct 41525 AGGACGAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCT 41584
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863
||||||||||| || |||||||||| || || |||||
Sbjct 41585 TCCAGTTGCTTCCCCGCGAAGATCAAGCGCTGTTGGTC 41622
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325682650292783
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |