Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1986 113 4e-20 seq2206 102 8e-17 >seq1986 Length=559288 Score = 113 bits (124), Expect = 4e-20 Identities = 148/203 (73%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCTGCTTGC 133521 ||||| || ||||| || ||||| || | || | | |||| ||||| |||||||| | Sbjct 253668 GTGGATTCCTTCTGAATGTTGTAGTC--CGATAGGGTACGACCATCCTCAAGCTGCTTTC 253725 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || |||| | || || |||||||| ||||||||||||||||| |||||| || Sbjct 253726 CAGCAAAAATCAATCGTTGTTGGTCGGGCGGGATGCCTTCCTTGTCCTGGATCTTGGCCT 253785 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||| | | ||| || |||| |||| ||| ||||| || || | Sbjct 253786 TGACGTTATCGATGGTGTCAGGCGACTCGACCTCGAGAGTGATGGTCTTGCCAGTGAGGG 253845 Query 133642 TTTTTACGAAAATCTGCATGGCT 133664 | || |||||||| |||||| || Sbjct 253846 TCTTGACGAAAATTTGCATGCCT 253868 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/203 (71%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||||||||| || || |||||| | || | | | || |||||||| || | Sbjct 253164 GGTCGACTCTTTCTGGATGTTATAATCGGAGAGGGTACGGCCA-TCTTCGAGCTGTTTTC 253222 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || |||| || || |||||||| || ||||||||||||||||| ||||| || Sbjct 253223 CAGCAAAAATAAGACGTTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGAATCTTGGCCT 253282 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||||| | | ||| || |||| || | ||||| ||||| | || Sbjct 253283 TTACATTGTCGATGGTGTCCGAAGACTCGACTTCGAGCGTTATCGTTTTTCCGGTTAAAG 253342 Query 133642 TTTTTACGAAAATCTGCATGGCT 133664 | || ||||| || |||||| || Sbjct 253343 TCTTCACGAAGATTTGCATGCCT 253365 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | || ||| | || ||||||||||| || Sbjct 253440 GTTGACTCCTTCTGGATGTTGTAATCGGAGAGGGTACGACCA-TCTTCGAGCTGCTTTCC 253498 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| || || |||||||| || ||||| || |||||||| |||||| ||| Sbjct 253499 AGCGAAAATAAGACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTGGCCTT 253558 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | || || | | ||| || || | || | ||| || ||||||| ||| Sbjct 253559 TACGTTGTCGATAGTATCCGACGACTCGACCTCAAGTGTAATGGTCTTTCCGGTCAAAGT 253618 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 253619 CTTCACAAAGATCTGCAT 253636 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | ||| ||| | ||||| | |||||| || Sbjct 252937 GTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCA-TCCTCCAACTGCTTTCC 252995 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || | ||||| || || || || |||||||||||||| |||||| ||| Sbjct 252996 AGCAAAGATCAAACGCTGTTGATCAGGGGGTATGCCTTCCTTGTCCTGGATCTTGGCCTT 253055 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| ||||| | | ||| || || | || | ||| || ||||| || || Sbjct 253056 GACGTTGTCAATGGTGTCCGAAGACTCAACCTCAAGAGTAATGGTCTTTCCGGTGAGCGT 253115 Query 133643 TTTTACGAAAATCTGCATGGCT 133664 || || ||||| |||||| || Sbjct 253116 CTTGACAAAAATTTGCATGCCT 253137 >seq2206 Length=69542 Score = 102 bits (112), Expect = 8e-17 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || |||||||| || || ||||| || | || |||| ||||||||| ||||||| Sbjct 41312 GTAGACTCTTTTTGAATGTTGTAGTCAGAAAGAGT--ACGACCGTCCTCGAGTTGCTTGC 41369 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || || |||||||| ||||| |||||||||||||| ||||| || Sbjct 41370 CAGCGAAGATCAGACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTGGCCT 41429 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||||||| | |||||| || | |||| || || || || || | Sbjct 41430 TCACATTGTCGATGGTGTCGGAAGACTCCACCTCCAAAGTGATCGTCTTACCCGTGAGGG 41489 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 41490 TCTTGACGAAGATCTGCAT 41508 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || ||||||||||| || ||| ||||||| ||||| ||||||||||| || ||||||||| Sbjct 41126 TCTTCGAGCTGCTTCCCGGCGAAAATGAGACGCTGTTGGTCGGGAGGAATTCCTTCCTTG 41185 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||| | | |||| ||||||| | ||| || || | ||| | Sbjct 41186 TCCTGAATCTTTGCCTTCACGTTGTCAATGGTGTCGGACGACTCGACCTCCAGGGTAATC 41245 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || || || || ||||| || ||||| Sbjct 41246 GTCTTACCCGTGAGGGTCTTGACGAAGATTTGCAT 41280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483405348662680