Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq2206 102 5e-17 seq1986 98.7 7e-16 >seq2206 Length=69542 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||| | || || || ||||||||| |||||||| || || Sbjct 41281 ACCACCACGGAGACGAAGCACGAGGTGAAGTGTAGACTCTTTTTGAATGTTGTAGTCAGA 41340 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || |||| || | ||| || || || || |||| ||| ||||| || | || Sbjct 41341 AAGAGTACGACCGTCCTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCAGGAGG 41400 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| ||| || |||| ||| ||| | ||||||| || |||| Sbjct 41401 AATGCCTTCCTTGTCCTGAATCTTGGCCTTCA-CATTGTCGATGGTGTCGGAAGACTCCA 41459 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | |||||||| ||||| || | || || || |||||||||||| Sbjct 41460 CCTCCAAAGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCATA 41509 >seq1986 Length=559288 Score = 98.7 bits (108), Expect = 7e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 |||||| || ||||| ||||||||||| || || | || || | |||||||| ||||| Sbjct 253170 CTCTTTCTGGATGTTATAATCGGAGAGGGTACGGCCATCTTCGAGCTGTTTTCCAGCAAA 253229 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 ||| | ||| ||||| || | || | ||||| ||||| ||| || | | |||| Sbjct 253230 AATAAGACGTTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGAATCTT-GGCCTTTACAT 253288 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| | |||||| || || || || | ||| |||||||| || ||||| || || | Sbjct 253289 TGTCGATGGTGTCCGAAGACTCGACTTCGAGCGTTATCGTTTTTCCGGTTAAAGTCTTCA 253348 Query 33737 CAAAGATCTGCAT 33749 | ||||| ||||| Sbjct 253349 CGAAGATTTGCAT 253361 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/212 (71%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 33540 CACCAAA-TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGT 33598 |||||| || ||||| ||| || || ||||||||||| ||||| ||||| | || | Sbjct 252923 CACCAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCT 252982 Query 33599 CCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGG 33658 |||| || ||||| ||||| ||||||||||| ||||| | || | ||||| ||||| Sbjct 252983 CCAACTGCTTTCCAGCAAAGATCAAACGCTGTTGATCAGGGGGTATGCCTTCCTTGTCCT 253042 Query 33659 CAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTT 33717 || || | | || | ||| | |||||| || || || |||| || || || Sbjct 253043 GGATCTT-GGCCTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCAAGAGTAATGGTC 253101 Query 33718 TTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || || | ||| || ||||| || ||||| Sbjct 253102 TTTCCGGTGAGCGTCTTGACAAAAATTTGCAT 253133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328693756453440