Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2206 111 4e-19 seq1986 109 1e-18 >seq2206 Length=69542 Score = 111 bits (122), Expect = 4e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || |||||||||||||| ||||| ||| ||| Sbjct 41505 CAGATCTTCGTCAAGACCCTCACGGGTAAGACGATCACTTTGGAGGTGGAGTCTTCCGAC 41446 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || || ||||| ||| || ||| ||| Sbjct 41445 ACCATCGACAATGTGAAGGCCAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAGCAA 41386 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||| || ||||| | || || || | ||| | | || |||||| | Sbjct 41385 CGTCTGATCTTCGCTGGCAAGCAACTCGAGGACGGTCGTACTCTTTCTGACTACAACATT 41326 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 || ||||||||||| |||||||| || Sbjct 41325 CAAAAAGAGTCTACACTTCACCTCGT 41300 Score = 102 bits (112), Expect = 2e-16 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| || || ||||| || |||| || || || ||||| | || Sbjct 41266 CAAGACCCTCACGGGTAAGACGATTACCCTGGAGGTCGAGTCGTCCGACACCATTGACAA 41207 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||||||| || || ||||||||| || ||| || | || || || Sbjct 41206 CGTGAAGGCAAAGATTCAGGACAAGGAAGGAATTCCTCCCGACCAACAGCGTCTCATTTT 41147 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| |||||| | |||||||| | ||| | |||| || ||| | ||||| ||||| Sbjct 41146 CGCCGGGAAGCAGCTCGAAGATGGGCGTACTCTTTCCGACTATAACATTCAGAAGGAGTC 41087 Query 206364 TACTCTTCACCTTG 206377 |||||| ||||||| Sbjct 41086 TACTCTCCACCTTG 41073 Score = 84.2 bits (92), Expect = 5e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 204765 CAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCCA 204824 ||||||| ||||||||||| ||||| | |||||||| | | ||| | |||||||| | Sbjct 41073 CAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCGGAAAGAGTACGCCCATCTTCGA 41132 Query 204825 GCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||||| |||||||| || || || ||||| Sbjct 41133 GCTGCTTCCCGGCGAAAATGAGACGCTGTTG 41163 >seq1986 Length=559288 Score = 109 bits (120), Expect = 1e-18 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || ||||||||||| || | ||||| || ||| ||||| |||| |||||| Sbjct 253337 ACCGGAAAAACGATAACGCTCGAAGTCGAGTCTTCGGACACCATCGACAATGTAAAGGCC 253278 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 |||||||| || || ||||| || || ||| ||| | ||||| || || ||||| Sbjct 253277 AAGATTCAGGACAAGGAAGGCATCCCCCCTGACCAGCAACGTCTTATTTTTGCTGGAAAA 253218 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | |||||||| | || | ||||||| ||| ||||||||||||| || |||||| Sbjct 253217 CAGCTCGAAGATGGCCGTACCCTCTCCGATTATAACATCCAGAAAGAGTCGACCCTTCAC 253158 Query 206374 CTTGT 206378 ||||| Sbjct 253157 CTTGT 253153 Score = 102 bits (112), Expect = 2e-16 Identities = 147/203 (72%), Gaps = 7/203 (3%) Strand=Plus/Minus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| |||||||| ||||| || || ||| | || || || ||| ||||| | Sbjct 253125 TTTTGTCAAGACGCTCACCGGAAAGACCATTACTCTTGAGGTTGAGTCTTCGGACACCAT 253066 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA-AGAC 206296 || || ||| ||||| || || || ||||| || || || |||| || Sbjct 253065 TGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATACCCCCTGA---TCAACAGCG 253009 Query 206297 TT--ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCA 206354 || ||||| || |||||||||||||| ||||| | ||| | | ||||||||| |||| Sbjct 253008 TTTGATCTTTGCTGGAAAGCAGTTGGAGGATGGTCGCACTCTCTCGGATTACAACATCCA 252949 Query 206355 GAAAGAGTCTACTCTTCACCTTG 206377 ||| ||||| ||||||||||||| Sbjct 252948 GAAGGAGTCGACTCTTCACCTTG 252926 Score = 91.5 bits (100), Expect = 3e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||| || || || || || || || ||| ||| | ||||| ||| Sbjct 253561 GTAAAGGCCAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAGCAACGTCTTATTTTC 253502 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || ||||||||| | |||||||| | || | ||||||||||| ||||||| ||||| Sbjct 253501 GCTGGAAAGCAGCTCGAAGATGGTCGTACCCTCTCCGATTACAACATCCAGAAGGAGTCA 253442 Query 206365 ACTCTTCACCTTG 206377 ||||||||||||| Sbjct 253441 ACTCTTCACCTTG 253429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181782081703997