Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2206 98.7 9e-16 seq1986 87.8 2e-12 seq2370 82.4 7e-11 >seq2206 Length=69542 Score = 98.7 bits (108), Expect = 9e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || |||||||| |||||| | |||||| |||||||||||| || |||| Sbjct 41087 GACTCCTTCTGAATGTTATAGTCGGAAAGAGTACGCCCATCTTCGAGCTGCTTCCCGGCG 41146 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || ||||||||||| || ||||| || ||||| || || ||| ||| |||| Sbjct 41147 AAAATGAGACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCCTGAATCTTTGCCTTCACG 41206 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || |||| || ||| || || | || | ||| ||||| || || || || Sbjct 41207 TTGTCAATGGTGTCGGACGACTCGACCTCCAGGGTAATCGTCTTACCCGTGAGGGTCTTG 41266 Query 132110 ATGAAAATCTGCAT 132123 | ||| || ||||| Sbjct 41267 ACGAAGATTTGCAT 41280 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||||||||||||||||||||| | ||||| || ||||| || || || | Sbjct 41315 GACTCTTTTTGAATGTTGTAGTCAGAAAGAGTACGACCGTCCTCGAGTTGCTTGCCAGCG 41374 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| ||||| || || || ||||| |||||||| || || ||| || |||| Sbjct 41375 AAGATCAGACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTGGCCTTCACA 41434 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || |||| | |||||| || | || | ||| ||||| || || || || Sbjct 41435 TTGTCGATGGTGTCGGAAGACTCCACCTCCAAAGTGATCGTCTTACCCGTGAGGGTCTTG 41494 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 41495 ACGAAGATCTGCAT 41508 >seq1986 Length=559288 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| || ||||| || ||| | |||||| ||||||||||||||| || | | Sbjct 253168 GACTCTTTCTGGATGTTATAATCGGAGAGGGTACGGCCATCTTCGAGCTGTTTTCCAGCA 253227 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || ||||| || || || || || |||||||| || || ||| || || | Sbjct 253228 AAAATAAGACGTTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGAATCTTGGCCTTTACA 253287 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | | ||| ||||||| ||| | |||||| || || | ||| || Sbjct 253288 TTGTCGATGGTGTCCGAAGACTCGACTTCGAGCGTTATCGTTTTTCCGGTTAAAGTCTTC 253347 Query 132110 ATGAAAATCTGCATGACT 132127 | ||| || |||||| || Sbjct 253348 ACGAAGATTTGCATGCCT 253365 >seq2370 Length=49093 Score = 82.4 bits (90), Expect = 7e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | | ||||| || |||||||||||||| || | || || | Sbjct 22855 CGCAACACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCACTGAGAGTGCGGCCA 22914 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTAT 132018 |||||||||||||| || | | |||| |||||||| || || || || || Sbjct 22915 TCTTCGAGCTGTTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGAAT 22964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476595966314520