Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2123 170 3e-36 seq2416 140 5e-27 >seq2123 Length=425399 Score = 170 bits (188), Expect = 3e-36 Identities = 349/505 (69%), Gaps = 14/505 (3%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || |||||||| ||||| || ||||||||||| ||| | || | Sbjct 272203 GATCTGGCAAATGTAC-AAGAAGGCCGAAGCCTCATTCTGGACCGCCGAAGAGATGGATC 272145 Query 1455835 TCGGCGCCG-ACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATC 1455890 | | || | || | | ||||| ||| ||| ||| ||||||| ||||||||| Sbjct 272144 T-GTCGAAGGACTTGCACGACTGGAACAACCGCATGAACGAAAACGAGCGTCATTTCATC 272086 Query 1455891 AAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGG 1455950 ||||||||||| || || |||||| ||||| || || |||||| || | || Sbjct 272085 TCACACGTCCTCGCATTCTT-CGCCGCTTCTGATGGGATTGTCAACGAGAATCTCGTCGA 272027 Query 1455951 CCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGC 1456010 || || || || || || | || || || | || ||||||||||| ||| Sbjct 272026 GCGTTTCTCTAATGAAGTGCAGGCTGCTGAAGCGCGGTGCTTCTACGGGTTCCAAATCAT 271967 Query 1456011 CATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070 || || ||||| ||||||||||| ||||| ||||| |||||||||||| | || || Sbjct 271966 GATGGAGAACATTCACTCTGAAACATACTCACTCCTCATCGACACCTACATTAAAGA--T 271909 Query 1456071 GGTCGAGAA--GGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAG 1456128 | ||| || ||| |||||||| ||| | || || | || | || | | ||| Sbjct 271908 GCTCGCCAACGGGAACACCTCTTCGATGCCGTTGAAACCATCCCCTGCGTCAAGCGCAAG 271849 Query 1456129 GCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCG 1456188 ||||||||||| | |||||| | | | ||||| ||||| ||||| || | Sbjct 271848 GCCGACTGGGCTCTTCGATGGATCTCCGA-TACACGCTCGA-TCTTTGGTGAGCGTCTGG 271791 Query 1456189 TCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGC 1456247 | | ||| || | ||||||||| ||||| |||||||| ||| || || || ||| Sbjct 271790 TTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCTCGGGGTCGTTCGCTGCTATTTTCTGGA 271731 Query 1456248 TCAAGAAGCGCGGCCTCATGCCCGG 1456272 | |||||||| || | |||||||| Sbjct 271730 TGAAGAAGCGTGGTTTGATGCCCGG 271706 Score = 123 bits (136), Expect = 4e-22 Identities = 283/417 (68%), Gaps = 22/417 (5%) Strand=Plus/Plus Query 1455905 CTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAG 1455964 |||| ||||| || ||||| || ||| ||||||||| | | || ||| || | Sbjct 273434 CTTTCTTCGCTGCGTCAGATGGAATAGTGAACGAGAACCTAGTAGAACGGTTTTCAAACG 273493 Query 1455965 AGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCC 1456024 |||| ||| || |||| || || | ||||| || ||||| || || |||||||||| Sbjct 273494 AGGTGCAAGTGGCAGAAGCGCGATGTTTTTATGGTTTCCAAATTATGATGGAAAACATCC 273553 Query 1456025 ACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACC 1456084 |||| || | ||||| || || || ||||||||| |||| ||||| ||| | | Sbjct 273554 ACTCCGAGGCATACTCTCTTCTCATAGACACCTACATCAAAGACCCAACCGAACGGCAAT 273613 Query 1456085 ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGAT-- 1456142 | || ||| ||| || || || | || | | | ||||| |||||||| || Sbjct 273614 ATCTGTTTGACGCGATAGAAACCATTCCTTGCATCCGACGGAAGGCTGACTGGGCAATCC 273673 Query 1456143 ----GA-AGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTT- 1456196 || | |||| ||||| | || ||||| || || | || |||||| Sbjct 273674 GCTGGATATCGGATAAACAA-----ACATC----TTTTGCTGAACGTTTGGT-GGCTTTC 273723 Query 1456197 GCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATCTTTTGGCTCAAGAA 1456254 || || || ||||| ||||||||||| ||| || ||| |||| |||||| | ||||| Sbjct 273724 GCTGCGGTGGAGGGAATCTTTTTCTCCGGCTCCTT-TGCTTCCATATTTTGGATAAAGAA 273782 Query 1456255 GCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGAAG 1456311 ||| || || ||||| || | | || | ||||||||| |||||||| ||||||| Sbjct 273783 GCGAGGTCTTATGCCAGGAC-TGACCTATTCCAACGAATTGATCAGTCGTGACGAAG 273838 Score = 86.0 bits (94), Expect = 9e-11 Identities = 115/156 (74%), Gaps = 3/156 (2%) Strand=Plus/Minus Query 1456586 ATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGC 1456645 ||||| |||||||||| || ||||| |||||||| || ||| |||||||||||||||| Sbjct 271478 ATCGGGATGAACGCCAAA-CTTATGTGTCAGTACATCGAGTTT-GTCGCCGACCGCCTGC 271421 Query 1456646 TCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAG 1456705 | | || | || || | ||| |||| | | ||||| ||| | ||||| Sbjct 271420 TTGTTGCATTGGGTAACG-ACAAGGTCTACAACAGCACGAACCCCTTCGACTTCATGGAT 271362 Query 1456706 TTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741 |||||||||| |||||||||||||||| || ||| Sbjct 271361 ATGATCTCGCTGCAGGGCAAGACCAACTTCTTTGAG 271326 >seq2416 Length=74831 Score = 140 bits (154), Expect = 5e-27 Identities = 365/542 (67%), Gaps = 15/542 (3%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| |||||| | || || || || ||||| || || || | || | Sbjct 66694 GATCTGGCAAATGTACAAAAAAG-CAGAAGCATCATTCTGGACTGCGGAAGAAATGGATC 66752 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891 | | ||| | | ||||| ||| ||| ||| ||||||| || |||||| Sbjct 66753 TATCCAAAGACTTGCACGACTGGAACAACCGCATGAATGACAACGAGCGTCACTTCATCT 66812 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 || |||||||| ||| |||||||| || ||||| || ||| ||||| | | Sbjct 66813 CTCATGTCCTCGC-TTTCTTCGCCGCTTCAGACGGCATTGTTAACGAAAACCTCGTGGAA 66871 Query 1455952 CGCTTTATGAAA-GAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGC 1456010 || ||| | ||| || || || | || || |||| || ||||| ||||||||| Sbjct 66872 CG-TTTCTCAAATGAAGTTCAGGCCGCCGAAGCGCGTTGTTTCTACGGTTTCCAGATCAT 66930 Query 1456011 CATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070 || ||||| || || || || || ||||| ||||| |||||||||||| |||| ||||| Sbjct 66931 GATGGAAAATATTCATTCCGAGACATACTCCCTCCTCATCGACACCTACATCAAAGACCC 66990 Query 1456071 GGTCGAGAA--GGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAG 1456128 |||| || || |||||||| || | || || | || | || | | ||| Sbjct 66991 --TCGACAACGCGAACACCTCTTCGATGCTGTTGAAACCATTCCTTGTGTCAAGCGTAAG 67048 Query 1456129 GCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCG 1456188 || |||||||| | |||||| | || | || ||| || | || || || | Sbjct 67049 GCTGACTGGGCTCTCCGATGGATCTCGGACAAGCG-TTCAACA-TTCGGTGAACGCCTTG 67106 Query 1456189 TCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGC 1456247 ||| ||||| || || || ||||| || ||||| || ||| ||||||||| ||| Sbjct 67107 TCGCGTTTGCAGCGGTAGAAGGCATTTTCTTCTCCGGTTCATTCGCCGCCATCTTCTGGA 67166 Query 1456248 TCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGAC 1456307 | |||||||| || || ||||| || ||| ||| ||| || | ||||| || ||| Sbjct 67167 TGAAGAAGCGAGGGCTGATGCCTGG-CTTGACCTTCTCCAATGAGCTCATCAGCCGTGAC 67225 Query 1456308 GA 1456309 || Sbjct 67226 GA 67227 Score = 87.8 bits (96), Expect = 3e-11 Identities = 136/189 (72%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 |||||||| |||||||| | ||||||||| |||||||| || ||| || |||||||||| Sbjct 67419 CTCATCGGAATGAACGCTAA-GCTCATGTGTCAGTACATCGAGTTT-GTTGCCGACCGCC 67476 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 |||||| || | || | || ||| |||| | ||||||| ||| | ||| Sbjct 67477 TGCTCGTTGC-TTTGGGTAACGACAAGATCTACAACAGCACCAACCCCTTCGACTTCATG 67535 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC-GAGTACGCC 1456761 || |||| ||| | | || ||||| ||||| |||||| || || | || ||| || Sbjct 67536 GACATGATTTCGTTGCAAGGAAAGACAAACTTCTTCGAGAAGCGAGTATCTGATTACTCC 67595 Query 1456762 AAGGCCGGC 1456770 ||||| ||| Sbjct 67596 AAGGCTGGC 67604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177564572650234