Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2206 113 4e-20 seq1986 98.7 9e-16 >seq2206 Length=69542 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| |||||||||||||| || | | || || |||| || || ||||| || || || Sbjct 41317 CTCTTTTTGAATGTTGTAGTCAGAAAGAGTACGACCGTCCTCGAGTTGCTTGCCAGCGAA 41376 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||||| | ||||| || ||||||||| ||||| ||||| | | Sbjct 41377 GATCAGACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTGGCCTTCACATT 41436 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || |||||||||| |||||||| |||||||| | || || || Sbjct 41437 GTCGATGGTGTCGGAAGACTCCACCTCCAAAGTGATCGTCTTACCCGTGAGGGTCTTGAC 41496 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 41497 GAAGATCTGCAT 41508 >seq1986 Length=559288 Score = 98.7 bits (108), Expect = 9e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||||| | ||| || | || || |||||||| || || || Sbjct 253445 CTCCTTCTGGATGTTGTAATCGGAGAGGGTACGACCATCTTCGAGCTGCTTTCCAGCGAA 253504 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || |||||||| | || | | |||||||||| |||||| ||| | || Sbjct 253505 AATAAGACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTGGCCTTTA-CGT 253563 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | || || ||| || ||||| | || || || || || |||||||| |||| Sbjct 253564 TGTCGATAGTATCCGACGACTCGACCTCAAGTGTAATGGTCTTTCCGGTCAAAGTCTTCA 253623 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 253624 CAAAGATCTGCAT 253636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450779191509560