Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1986 134 1e-26 seq2206 125 7e-24 seq2370 86.0 6e-12 >seq1986 Length=559288 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || ||||||||||| |||||||||||||| Sbjct 253638 CCGCCACGGAGACGGAGGACAAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCCGAT 253697 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || || || ||||| || || ||||||||||| || || || |||||||| Sbjct 253698 AGGGTACGACCATCCTCAAGCTGCTTTCCAGCAAAAATCAATCGTTGTTGGTCGGGCGGG 253757 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || ||||| || | ||||| | ||| || || Sbjct 253758 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTATCGATGGTGTCAGGCGACTCGACC 253817 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||||| ||||| || || || | || || |||||||||||||| Sbjct 253818 TCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATTTGCAT 253864 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || || | || ||||| || || || || || || ||||| || ||| Sbjct 253135 CCTCCACGAAGACGGAGGACAAGGTGAAGGGTCGACTCTTTCTGGATGTTATAATCGGAG 253194 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || ||||||||||| || |||||||| | ||| ||||| || || || Sbjct 253195 AGGGTACGGCCATCTTCGAGCTGTTTTCCAGCAAAAATAAGACGTTGCTGGTCAGGGGGG 253254 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || ||||| || || || ||| | ||||| || || || || Sbjct 253255 ATGCCTTCCTTGTCCTGAATCTTGGCCTTTACATTGTCGATGGTGTCCGAAGACTCGACT 253314 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || ||||| ||||||||||| || ||||| |||||||| Sbjct 253315 TCGAGCGTTATCGTTTTTCCGGTTAAAGTCTTCACGAAGATTTGCAT 253361 Score = 120 bits (132), Expect = 3e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 ||||| || || || ||||| || |||||||| || | ||| || || || | | Sbjct 252928 AGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCCAAC 252987 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || || || ||||| ||||||||||| ||||| || ||||||||||| || || || || Sbjct 252988 TGCTTTCCAGCAAAGATCAAACGCTGTTGATCAGGGGGTATGCCTTCCTTGTCCTGGATC 253047 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || ||||| ||| | ||||| || || || || || ||||||||||| || ||| Sbjct 253048 TTGGCCTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCAAGAGTAATGGTCTTTCCG 253107 Query 134688 GTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || || || ||||||||||| Sbjct 253108 GTGAGCGTCTTGACAAAAATTTGCAT 253133 >seq2206 Length=69542 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||||||| || || || || ||||||||||||||||| | Sbjct 41282 CCACCACGGAGACGAAGCACGAGGTGAAGTGTAGACTCTTTTTGAATGTTGTAGTCAGAA 41341 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || ||| ||||| || ||||| || || |||| ||| ||||| || || || Sbjct 41342 AGAGTACGACCGTCCTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCAGGAGGA 41401 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || ||||| || || || ||| | |||||||| || ||||| Sbjct 41402 ATGCCTTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCCACC 41461 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| || || ||||| || | || || ||||| || ||||| Sbjct 41462 TCCAAAGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 41508 Score = 120 bits (132), Expect = 3e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 ||||| || || || ||||| |||||||| |||||| || || | || |||||| Sbjct 41075 AGGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCGGAAAGAGTACGCCCATCTTCGAGC 41134 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || || || || ||||| | |||||| || ||||| || || ||||| || || ||||| Sbjct 41135 TGCTTCCCGGCGAAAATGAGACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCCTGAATC 41194 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 ||| || || ||| | ||||||||||| || || || || ||||| || ||||| Sbjct 41195 TTTGCCTTCACGTTGTCAATGGTGTCGGACGACTCGACCTCCAGGGTAATCGTCTTACCC 41254 Query 134688 GTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || || ||||| |||||||| Sbjct 41255 GTGAGGGTCTTGACGAAGATTTGCAT 41280 >seq2370 Length=49093 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||||||| | ||| || || || ||||| |||||||||||||| | Sbjct 22843 CCACCGCGGAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCACTG 22902 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || ||||||||||| || ||||| |||| ||||||||| || || || Sbjct 22903 AGAGTGCGGCCATCTTCGAGCTGTTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGA 22962 Query 134607 AT 134608 || Sbjct 22963 AT 22964 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 134610 CCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCG 134669 ||||| || || || ||||| |||||| ||| | ||||| || ||||| || ||| Sbjct 23018 CCTTCCTTGTCCTGGATTTTGGCTTTGACATTGTCGATGGTGTCTGAGGATTCAACCTCG 23077 Query 134670 AGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||||||||||||||| || | ||||| |||||||| ||||| Sbjct 23078 AGAGTAATGGTTTTACCCGTGAGGGTTTTGACGAAAATCTGCAT 23121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505382246203640