Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2123 154 2e-32 seq2416 129 8e-25 >seq2123 Length=425399 Score = 154 bits (170), Expect = 2e-32 Identities = 364/545 (67%), Gaps = 10/545 (2%) Strand=Plus/Minus Query 39631 ATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACC 39690 ||||| || || || | ||| || |||||||| ||| | || ||||| ||||| ||||| Sbjct 273846 ATGTAACCCTTCGTCACGACTGATCAATTCGTTGGAATAGGTCAGTCCTGGCATAAGACC 273787 Query 39691 ACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGC 39750 ||||| || | ||||||||||| |||||| || || || || ||||| || || || || Sbjct 273786 TCGCTTCTTTATCCAAAATATGGAAGCAAAGGAGCCGGAGAAAAAGATTCCCTCCACCGC 273727 Query 39751 TGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT---GTATCCACTTCTGTGC 39807 || || || || | | || | || ||| | |||| |||||| ||| Sbjct 273726 AGCGAAAGCCACCAAACGTTCAGCAAAAGATGTTTGTTTATCCGATATCCAGCGGATTGC 273667 Query 39808 CCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGTTT 39867 ||| ||||| ||| | ||||| || |||||||| || | ||| ||||| || Sbjct 273666 CCAGTCAGCCTTCCGTCGGATGCAAGGAATGGTTTCTATCGCGTCAAACAGATATTGCCG 273607 Query 39868 TTCATCACTATCTTTAACATATGTATCTAT--TAACAGACTATACATTTCTGAATGGATG 39925 ||| ||||| | || || ||||| || ||| ||| | || || |||||| Sbjct 273606 TTCGGTTGGGTCTTTGATGTAGGTGTCTATGAGAAGAGAGTATGC--CTCGGAGTGGATG 273549 Query 39926 TTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAA 39985 ||||| ||| || || || || |||||||||| ||||| | | ||| ||||| Sbjct 273548 TTTTCCATCATAATTTGGAAACCATAAAAACATCGCGCTTCTGCCACTTGCACCTCGTTT 273489 Query 39986 CAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAAT 40045 |||| | ||| | | || || |||||||||||||| || || || || || | Sbjct 273488 GAAAACCGTTCTACTAGGTTCTCGTTCACTATTCCATCTGACGCAGCGAAGAAAGCAAGA 273429 Query 40046 ACATGTTTAATAAAATATTTTTCA-TCGGGTGTCAA--TTTATTCCAGTCATTGATATCT 40102 || | | |||||| |||| | || | || | |||||||| | | || Sbjct 273428 ACCCGGGATACGAAATATCGTTCACTGTCGTTTAAACGGTGGTTCCAGTCCATCAAGTCG 273369 Query 40103 TTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTC 40162 || |||| |||| |||||| || ||||| || ||||| ||||| ||||||||| | Sbjct 273368 TTAGATAAGTCTATTTCTTCGGCAGTCCAGAATGACGCTTCTGCTCGTTTGTACATTCGC 273309 Query 40163 CATAT 40167 ||||| Sbjct 273308 CATAT 273304 >seq2416 Length=74831 Score = 129 bits (142), Expect = 8e-25 Identities = 366/562 (65%), Gaps = 14/562 (2%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||||| ||||| || | |||||| || | || || | || || || || || | Sbjct 67252 GCAGGCAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCATTGGAGAAGGTCAA 67193 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 |||||||| || || ||||| || | ||| || ||||| || || || || || ||||| Sbjct 67192 GCCAGGCATCAGCCCTCGCTTCTTCATCCAGAAGATGGCGGCGAATGAACCGGAGAAGAA 67133 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT---G 39792 ||||||||||| |||||||| || ||||| | || ||| | ||| | || | Sbjct 67132 AATGCCTTCTACCGCTGCAAACGCGACAAGGCGTTCACCGAATGTTGAACGCTTGTCCGA 67073 Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852 ||||| | ||||| ||||| || ||| |||||||| || ||||| | ||||| Sbjct 67072 GATCCATCGGAGAGCCCAGTCAGCCTTACGCTTGACACAAGGAATGGTTTCAACAGCATC 67013 Query 39853 AAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACAT 39912 ||||| | | || | ||||| | || || || || | || || | Sbjct 67012 GAAGAGGTGTTCGCGTTGTCGAGGGTCTTTGATGTAGGTGTCGATGAGGAGGGAGTATGT 66953 Query 39913 TTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 39972 || ||||| || ||||| ||| ||||| || ||||| ||||| | ||||| | Sbjct 66952 CTCGGAATGAATATTTTCCATCATGATCTGGAAACCGTAGAAACAACGCGCTTCGGCGGC 66893 Query 39973 TTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGC 40032 || || || | || | |||| | | ||||| || || || || || |||||| Sbjct 66892 CTGAACTTCATTTGAGAAACGTTCCACGAGGTTTTCGTTAACAATGCCGTCTGAAGCGGC 66833 Query 40033 AAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT-------TTAT 40085 || || || | ||||| || || | || | ||||| | || | Sbjct 66832 GAAGAAAGCGAGGACATGAGAGATGAAGTGACGCTC----GTTGTCATTCATGCGGTTGT 66777 Query 40086 TCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTG 40145 ||||||| | | ||||| |||| ||| | |||||| || ||||| || || || |||| Sbjct 66776 TCCAGTCGTGCAAGTCTTTGGATAGATCCATTTCTTCCGCAGTCCAGAATGATGCTTCTG 66717 Query 40146 CCTTTTTGTACATGTTCCATAT 40167 | ||||||||||| | ||| || Sbjct 66716 CTTTTTTGTACATTTGCCAGAT 66695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686886844677480