Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq2123 217 1e-51 seq2416 181 8e-41 >seq2123 Length=425399 Score = 217 bits (240), Expect = 1e-51 Identities = 392/568 (69%), Gaps = 14/568 (2%) Strand=Plus/Plus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 ||||||| |||||||||| |||| | |||||||| ||||| || |||||| | || || Sbjct 273304 ATATGGCGAATGTACAAACGAGCAGAAGCGTCATTCTGGACTGCCGAAGAAATAGACTTA 273363 Query 43790 ACTAAAGACTTAGCACATTGGATTG--CATTAAAACCACAA-GAAAAACATTTTATATCT 43846 |||| ||||| | |||| | || |||| ||| ||| | |||| |||| Sbjct 273364 TCTAACGACTTGATGGACTGGAACCACCGTTTAAACGACAGTGAACGATATTTCGTATCC 273423 Query 43847 TTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGG 43906 |||| | || || || |||||| || || ||||| || || || | || ||| Sbjct 273424 CGGGTTCTTGCTTTCTTCGCTGCGTCAGATGGAATAGTGAACGAGAACCTAGTAGAACGG 273483 Query 43907 TTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATA 43966 ||| | | || || ||| | ||||||| |||||||||||||| || |||||| || Sbjct 273484 TTTTCAAACGAGGTGCAAGTGGCAGAAGCGCGATGTTTTTATGGTTTCCAAATTATGATG 273543 Query 43967 GAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCAC 44026 ||||| || || || || ||| |||||| ||||| || ||||||||||| | Sbjct 273544 GAAAACATCCACTCCGAGGCATACTCTCTTCTCATAGACACCTACATCAAAGACCCAACC 273603 Query 44027 GAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGAC 44086 || ||| ||||| | ||||||||||| | ||| || || || || ||| Sbjct 273604 GAACGGCAATATCTGTTTGACGCGATAGAAACCATTCCTTGCATCCGACGGAAGGCTGAC 273663 Query 44087 TGGGCCCTT------AAAT-GGATAAATTCAAATGATTCTTTTGGAGAACGACTTGTCGC 44139 ||||| | | || ||||||| |||| ||||||| ||||| | || || Sbjct 273664 TGGGCAATCCGCTGGATATCGGATAAA--CAAACA--TCTTTTGCTGAACGTTTGGTGGC 273719 Query 44140 GTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAA 44199 || || | ||||| || || || || || || || ||||| ||||||||||| |||| Sbjct 273720 TTTCGCTGCGGTGGAGGGAATCTTTTTCTCCGGCTCCTTTGCTTCCATATTTTGGATAAA 273779 Query 44200 GAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGG 44259 ||| |||||| | ||||| || |||| | ||| || || || || |||||||| ||||| Sbjct 273780 GAAGCGAGGTCTTATGCCAGGACTGACCTATTCCAACGAATTGATCAGTCGTGACGAAGG 273839 Query 44260 CTTACATTGCGATTTTGCTTGCTTGTTA 44287 |||||| || |||||| || ||||| Sbjct 273840 GTTACATACAGAGTTTGCTAGCCTGTTA 273867 Score = 134 bits (148), Expect = 1e-26 Identities = 379/571 (66%), Gaps = 32/571 (6%) Strand=Plus/Minus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 || |||||||||||||| || || | || ||||| ||||| || ||||| | ||| || Sbjct 272202 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCATTCTGGACCGCCGAAGAGATGGATCTG 272143 Query 43790 ACTAAAGACTTAGCACATTGGATTGCATTAAAACCACAAGAA---AAAC-------ATTT 43839 | || ||||| |||| || || | | |||| || ||| |||| |||| Sbjct 272142 TCGAAGGACTT-GCAC----GACTGGA--ACAACCGCATGAACGAAAACGAGCGTCATTT 272090 Query 43840 TATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGT 43899 || || || | || || || || || || ||||| ||||| || ||| | || Sbjct 272089 CATCTCACACGTCCTCGCATTCTTCGCCGCTTCTGATGGGATTGTCAACGAGAATCTCGT 272030 Query 43900 TAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAAT 43959 || || | | ||||| || | ||||| || || || || ||||| ||||| Sbjct 272029 CGAGCGTTTCTCTAATGAAGTGCAGGCTGCTGAAGCGCGGTGCTTCTACGGGTTCCAAAT 271970 Query 43960 TGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGA 44019 || || || ||||| || |||| ||| || || || || || ||||| ||||| Sbjct 271969 CATGATGGAGAACATTCACTCTGAAACATACTCACTCCTCATCGACACCTACATTAAAGA 271910 Query 44020 TGGGC----ACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACC-TGCGATTAAA 44074 || | ||| ||| || | | || |||| | ||||| | || |||| | || Sbjct 271909 TGCTCGCCAACGGGAA-CACC---TCTTCGATGCCGTTGAAACCATCCCCTGCG-TCAAG 271855 Query 44075 CATAAAGCAGACTGGGCCCTTAAATGGATAA---ATTCAAA-TGATTCTTTTGGAGAACG 44130 | || || |||||||| ||| |||||| || || | ||||| || || || Sbjct 271854 CGCAAGGCCGACTGGGCTCTTCGATGGATCTCCGATACACGCTCGATCTTT-GGTGAGCG 271796 Query 44131 ACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATT 44190 || || || || || | || || || || ||||| || || ||||| || || || || Sbjct 271795 TCTGGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCTCGGGGTCGTTCGCTGCTATTTT 271736 Query 44191 TTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCG 44250 ||| | ||||| || ||||||||||| || |||||||| || ||||| | || || || Sbjct 271735 CTGGATGAAGAAGCGTGGTTTGATGCCCGGATTGACGTTCTCCAATGAACTCATTAGCCG 271676 Query 44251 TGATGAAGGCTTACATTGCGATTTTGCTTGC 44281 ||| || ||| | || ||||||||||||| Sbjct 271675 TGACGAGGGCATGCACACCGATTTTGCTTGC 271645 >seq2416 Length=74831 Score = 181 bits (200), Expect = 8e-41 Identities = 384/564 (68%), Gaps = 18/564 (3%) Strand=Plus/Plus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 || ||||||||||||||||||||| | || ||||| ||||| || |||||| | ||| | Sbjct 66695 ATCTGGCAAATGTACAAAAAAGCAGAAGCATCATTCTGGACTGCGGAAGAAATGGATCTA 66754 Query 43790 ACTAAAGACTTAGCAC-ATTGGATT----GCATTAAAACCACAAGAAAAACATTTTATAT 43844 | |||||||| |||| | |||| |||| || || | || || || || | Sbjct 66755 TCCAAAGACTT-GCACGACTGGAACAACCGCATGAATGACA-ACGAGCGTCACTTCATCT 66812 Query 43845 CTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTC 43904 || || | || || || || || ||||| || || || ||||| | || | Sbjct 66813 CTCATGTCCTCGCTTTCTTCGCCGCTTCAGACGGCATTGTTAACGAAAACCTCGTGGAAC 66872 Query 43905 GGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCA 43964 | || | | |||||||| | ||||| || ||||| || || || || || | Sbjct 66873 GTTTCTCAAATGAAGTTCAGGCCGCCGAAGCGCGTTGTTTCTACGGTTTCCAGATCATGA 66932 Query 43965 TAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGA---TG 44021 | |||||||||||||| || | ||| || || || || || ||||||||||| | Sbjct 66933 TGGAAAATATTCATTCCGAGACATACTCCCTCCTCATCGACACCTACATCAAAGACCCTC 66992 Query 44022 GGCA-CGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAA 44080 | || || ||| || | | || |||| | ||||| | ||| | || | ||| Sbjct 66993 GACAACGCGAA-CACC---TCTTCGATGCTGTTGAAACCATTCCTTGTGTCAAGCGTAAG 67048 Query 44081 GCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCT---TTTGGAGAACGACTTGTC 44137 || |||||||| || |||||| || ||| || || ||||| |||||| Sbjct 67049 GCTGACTGGGCTCTCCGATGGATCTCGGACAAGCGTTCAACATTCGGTGAACGCCTTGTC 67108 Query 44138 GCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTA 44197 |||||||||| || |||||||||||||| || || || || || ||||| || ||| | Sbjct 67109 GCGTTTGCAGCGGTAGAAGGCATTTTCTTCTCCGGTTCATTCGCCGCCATCTTCTGGATG 67168 Query 44198 AAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAA 44257 ||||| ||||| |||||||||| ||||| || || |||||| | || || ||||| || Sbjct 67169 AAGAAGCGAGGGCTGATGCCTGGCTTGACCTTCTCCAATGAGCTCATCAGCCGTGACGAG 67228 Query 44258 GGCTTACATTGCGATTTTGCTTGC 44281 ||| | || ||| ||||| ||| Sbjct 67229 GGCATGCACACCGACTTTGCCTGC 67252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397443613904785