Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2206 91.5 1e-13 seq1986 84.2 2e-11 >seq2206 Length=69542 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || ||||| || |||||| | | ||| | ||||||||||| || ||| Sbjct 41084 GTAGACTCCTTCTGAATGTTATAGTCGGAAAGAGTACGCCCATCTTCGAGCTGCTTCCCG 41143 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| |||||||||||||||| || || || | || || || || ||||| ||| Sbjct 41144 GCGAAAATGAGACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCCTGAATCTTTGCCTTC 41203 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | | || || || || || || | || ||||| || || Sbjct 41204 ACGTTGTCAATGGTGTCGGACGACTCGACCTCCAGGGTAATCGTCTTACCCGTGAGGGTC 41263 Query 27231 TTCACAAAGATTTGCATA 27248 || || |||||||||||| Sbjct 41264 TTGACGAAGATTTGCATA 41281 >seq1986 Length=559288 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/213 (69%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 27037 ATACCAAA-TGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCT 27095 ||||||| || | || || || || || || ||||| ||| | | | || | ||| Sbjct 253425 ATACCAAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAATCGGAGAGGGTACGACCATCT 253484 Query 27096 TCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCG 27155 |||||||| || || ||| |||| ||||| || || || || || | |||||| || || Sbjct 253485 TCGAGCTGCTTTCCAGCGAAAATAAGACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCC 253544 Query 27156 GCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGAT 27215 ||||||| || | | | || | ||| || | | || || || || || || | Sbjct 253545 TGGATCTTGGCCTTTACGTTGTCGATAGTATCCGACGACTCGACCTCAAGTGTAATGGTC 253604 Query 27216 TTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || |||| ||| ||||||||||| |||||| Sbjct 253605 TTTCCGGTCAAAGTCTTCACAAAGATCTGCATA 253637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424921157583384