Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2416 91.5 2e-13 seq2123 89.7 6e-13 >seq2416 Length=74831 Score = 91.5 bits (100), Expect = 2e-13 Identities = 341/524 (65%), Gaps = 13/524 (2%) Strand=Plus/Minus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| | ||||| || ||| || || ||||| |||||| | || Sbjct 67249 GGCAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCATTGGAGAAGGTCAAGCC 67190 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777 ||||| || || |||||||||| ||| | || ||| |||||| ||||||||||| || Sbjct 67189 AGGCATCAGCCCTCGCTTCTTCATCCAGAAGATGGCGGCGAATGAACCGGAGAAGAAAAT 67130 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAA 122837 || || || |||||||| | ||||||||| |||| | | ||| | | Sbjct 67129 GCCTTCTACCGCTGCAAACGCGACAAGGCGTTCACCGAATGTTGAACGCTTGTCCGAGAT 67070 Query 122838 CCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAA 122897 |||| | ||||| | ||||| || | ||| || | |||| | || || || Sbjct 67069 CCATCGGAGAGCCCAGTCAGCCTTACGCTTGACACAAGGAATGGTTTCAACAGCATCGAA 67010 Query 122898 TAACTGCTTC---TTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGT 122954 | || ||| || || || || || ||||| |||| || | || ||||| Sbjct 67009 GAGGTG-TTCGCGTTGTC-GA-GGGTCTTTGATGTAGGTGTCGATGAGGAGGGAGTATGT 66953 Query 122955 TTCGCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTA 123013 ||| ||||| ||| ||| ||| | || | ||||||| | ||||||||| Sbjct 66952 CTCGGAATGAATATTTTCCATCATGATCTGGA-AACCGTAGAAACAACGCGCTTCGGCGG 66894 Query 123014 TCTGAACCTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 123073 |||||| |||| | ||| | || || || |||||| || || || | | Sbjct 66893 CCTGAACTTCATTTGAGAAACGTTCCACGAGGTTTTCGTTAACAATGCCGTCTGAAGCGG 66834 Query 123074 CAAAGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCC 123130 | ||||| || |||| | ||||| | || || ||||||| || | |||| Sbjct 66833 CGAAGAAAGCGAGGACATGAGAGATGAAGTGACGCTCGTTGTCATTCATGCGGTTGTTCC 66774 Query 123131 AGTCGT-CAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173 |||||| |||| |||||||| | ||| | ||||||||||||||| Sbjct 66773 AGTCGTGCAAG-TCTTTGGATAGATCCATTTCTTCCGCAGTCCA 66731 >seq2123 Length=425399 Score = 89.7 bits (98), Expect = 6e-13 Identities = 339/523 (65%), Gaps = 13/523 (2%) Strand=Plus/Plus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| | ||||| || ||| ||| |||||||| ||||| | || Sbjct 271649 GCAAAATCGGTGTGCATGCCCTCGTCACGGCTAATGAGTTCATTGGAGAACGTCAATCCG 271708 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778 ||||| | ||| |||||||||| ||| ||||||| ||| ||||| |||||||||||| Sbjct 271709 GGCATCAAACCACGCTTCTTCATCCAGAAAATAGCAGCGAACGACCCCGAGAAGAAGATA 271768 Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATC---A 122835 ||||| || || || |||| || || || | || || |||| || ||| Sbjct 271769 CCCTCGACGGCAGCGAAGGCAACCAGACGCTC-ACCAAAGATCGAG--CGTGTATCGGAG 271825 Query 122836 AACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCA 122895 | |||| | ||||| | ||||| || | || || | |||| | ||| || Sbjct 271826 ATCCATCGAAGAGCCCAGTCGGCCTTGCGCTTGACGCAGGGGATGGTTTCAACGGCATCG 271885 Query 122896 AATAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTT 122955 || | || | | || |||| |||||||| |||| || | ||| |||||| Sbjct 271886 AAGAGGTGTTCCCGTTGGCGAGCATCTTTAATGTAGGTGTCGATGAGGAGTGAGTATGTT 271945 Query 122956 TCGCCATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTAT 123014 || |||| | | ||| || | ||| | ||||||| | |||||||| Sbjct 271946 TCAGAGTGAATGTTCTCCATCAT-GATTTGGAACCCGTAGAAGCACCGCGCTTCAGCAGC 272004 Query 123015 CTGAACCTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGC 123074 ||| || |||| | ||| | || |||||| ||||| ||||| || | || Sbjct 272005 CTGCACTTCATTAGAGAAACGCTCGACGAGATTCTCGTTGACAATCCCATCAGAAGCGGC 272064 Query 123075 AAAGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCA 123131 |||||||| |||| || ||||| | || ||||| |||| || | ||||| Sbjct 272065 GAAGAATGCGAGGACGTGTGAGATGAAATGACGCTCGTTTTCGTTCATGCGGTTGTTCCA 272124 Query 123132 GTCGT-CAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173 ||||| |||| || || |||| ||| | ||||| || ||||| Sbjct 272125 GTCGTGCAAG-TCCTTCGACAGATCCATCTCTTCGGCGGTCCA 272166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628011926527200