Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2123 132 6e-26 seq2416 104 3e-17 seq1573 86.0 8e-12 >seq2123 Length=425399 Score = 132 bits (146), Expect = 6e-26 Identities = 376/565 (67%), Gaps = 27/565 (5%) Strand=Plus/Plus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | |||||||||||| ||||||||||| ||||| || || Sbjct 271649 GCAAAATCGGTGTGCATGCCCTCGTCACGGCTAATGAGTTCATTGGAGAACGTCAATCCG 271708 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||| | ||| |||||||||| ||||||||| ||| || || || ||||||||||| Sbjct 271709 GGCATCAAACCACGCTTCTTCATCCAGAAAATAGCAGCGAACGACCCCGAGAAGAAGATA 271768 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAG---GAGCGGGACTTTGTATC- 130191 ||||| || ||||| |||| ||||||||| ||||| ||||| |||||| Sbjct 271769 CCCTCGACGGCAGCGAAGGCAACCAGACGCTCACCAAAGATCGAGCG------TGTATCG 271822 Query 130192 --AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCT 130249 | ||| | ||||| | ||||| || || || |||| ||| | | || Sbjct 271823 GAGATCCATCGAAGAGCCCAGTCGGCCTTGCGCTTGACGCAGGGGATGGTTTCAACGGCA 271882 Query 130250 TCAAAGA---GTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAA 130306 || |||| ||||| | || || | |||||| ||||| | || ||||| ||| Sbjct 271883 TCGAAGAGGTGTTCC--CGTTGGCGA-GCATCTTTAATGTAGGTGTCGATGAGGAGTGAG 271939 Query 130307 TATGTTTCGCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTC 130365 |||||||| || | | | ||| || | || || ||||||| | |||||||| Sbjct 271940 TATGTTTCAGAGTGAATGTTCTCCATCAT-GATTTGGAACCCGTAGAAGCACCGCGCTTC 271998 Query 130366 GCTTATCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGA 130425 ||| || |||| | ||| | || |||||| ||||| ||||| || Sbjct 271999 AGCAGCCTGCACTTCATTAGAGAAACGCTCGACGAGATTCTCGTTGACAATCCCATCAGA 272058 Query 130426 CCCAGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGT 130482 | || || || || |||| | ||||| | | || || ||||||| || | Sbjct 272059 AGCGGCGAAGAATGCGAGGACGTGTGAGATGAAATGACGCTCGTTTTCGTTCATGCGGTT 272118 Query 130483 CTTCCAGTCGT-CAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA-ATTGCTCATT 130540 |||||||||| |||| |||||||| ||||| | ||| || || ||||| | || || Sbjct 272119 GTTCCAGTCGTGCAAG-TCCTTCGACAGATCCATCTCTTCGGCGGTCCAGAATGAGGCTT 272177 Query 130541 TGAGCCTTCTTATAGAGTTCCCAGA 130565 | |||||||| || | || ||||| Sbjct 272178 CG-GCCTTCTTGTACATTTGCCAGA 272201 >seq2416 Length=74831 Score = 104 bits (114), Expect = 3e-17 Identities = 347/526 (66%), Gaps = 17/526 (3%) Strand=Plus/Minus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || ||| | |||||||||||| |||||| ||||| |||||| || || Sbjct 67249 GGCAAAGTCGGTGTGCATGCCCTCGTCACGGCTGATGAGCTCATTGGAGAAGGTCAAGCC 67190 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 ||||| || || |||||||||| |||||| || || ||||| || |||||||| || Sbjct 67189 AGGCATCAGCCCTCGCTTCTTCATCCAGAAGATGGCGGCGAATGAACCGGAGAAGAAAAT 67130 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGAC-TTTGTATCA- 130192 || || || || ||||| | || || ||| | || | | || |||| | Sbjct 67129 GCCTTCTACCGCTGCAAACGCGACAAGGCGTTCACCGAA--TGTTGAACGCTTGTCCGAG 67072 Query 130193 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 130252 | ||| | ||||| | ||||| || || ||| || | ||| | | || || Sbjct 67071 ATCCATCGGAGAGCCCAGTCAGCCTTACGCTTGACACAAGGAATGGTTTCAACAGCATCG 67012 Query 130253 AAGAGTTCCTTC---TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATAT 130309 ||||| | ||| || || || || ||||||||||| | || ||||| || ||| Sbjct 67011 AAGAGGT-GTTCGCGTTGTC-GA-GGGTCTTTGATGTAGGTGTCGATGAGGAGGGAGTAT 66955 Query 130310 GTTTCGCCATGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCT 130368 || ||| ||| | ||| ||| || | ||| | |||||||| | ||||||||| Sbjct 66954 GTCTCGGAATGAATATTTTCCATCAT-GATCTGGAAACCGTAGAAACAACGCGCTTCGGC 66896 Query 130369 TATCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCC 130428 ||| || |||| || ||| | || || || |||||| || || || | Sbjct 66895 GGCCTGAACTTCATTTGAGAAACGTTCCACGAGGTTTTCGTTAACAATGCCGTCTGAAGC 66836 Query 130429 AGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTT 130485 || || || || |||| || ||||| | | || || || |||| || | || Sbjct 66835 GGCGAAGAAAGCGAGGACATGAGAGATGAAGTGACGCTCGTTGTCATTCATGCGGTTGTT 66776 Query 130486 CCAGTCGT-CAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||||||| |||| || || || ||||| | || ||||||||||| Sbjct 66775 CCAGTCGTGCAAG-TCTTTGGATAGATCCATTTCTTCCGCAGTCCA 66731 >seq1573 Length=133326 Score = 86.0 bits (94), Expect = 8e-12 Identities = 122/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 119297 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACT 119356 ||| ||||| | |||||||| || || ||||| ||| ||||| ||| | ||| | Sbjct 58302 GTGAATGTGAAGGCCAATACCACCAGCACACTTGCTGATCATAGCGCATTCCTTAAGAGT 58243 Query 119357 GCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 119416 ||||||| || || || ||||| |||| | |||| |||||| || || | || Sbjct 58242 ATCGTAGATGCCTTCTATTGAGTCGTCCTTCATGGCGACGAGGAAACACGAAGAGAGCTG 58183 Query 119417 AGGCCTG-GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464 || | || |||||||| ||||||||||||||||| | ||||| |||| Sbjct 58182 AG-CATGAGGTGTACCGGCGTTGAAGAGAGTTGGGGATGCGTGAGTGAA 58135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618415433264920