Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1986 167 7e-36 seq1627 165 2e-35 seq2206 163 9e-35 seq1565 105 2e-17 seq2370 96.9 1e-14 seq1528 95.1 4e-14 seq2286 87.8 5e-12 seq2402 84.2 7e-11 >seq1986 Length=559288 Score = 167 bits (184), Expect = 7e-36 Identities = 178/235 (76%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| || ||||| | | || ||||| ||||| || |||||||| || || |||| Sbjct 253127 TTTGCATGCCTCCACGAAGACGGAGGACAAGGTGAAGGGTCGACTCTTTCTGGATGTTAT 253186 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || | || || |||||||| || |||||||||||||| || ||||||||||| | Sbjct 253187 AATCGGAGAGGGTACGGCCATCTTCGAGCTGTTTTCCAGCAAAAATAAGACGTTGCTGGT 253246 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| || || ||||| || |||||||| || || |||||||| || || | || || | Sbjct 253247 CAGGGGGGATGCCTTCCTTGTCCTGAATCTTGGCCTTTACATTGTCGATGGTGTCCGAAG 253306 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || || | || |||||||||| || || || || || ||||| Sbjct 253307 ACTCGACTTCGAGCGTTATCGTTTTTCCGGTTAAAGTCTTCACGAAGATTTGCAT 253361 Score = 154 bits (170), Expect = 4e-32 Identities = 159/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| |||||||| ||||| || || || || ||||| || | || || |||||||| | Sbjct 253429 CAAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAATCGGAGAGGGTACGACCATCTTCGA 253488 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || |||||||| || || ||||||||||| ||||| || || || || || ||||| | Sbjct 253489 GCTGCTTTCCAGCGAAAATAAGACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGA 253548 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || ||||| || || || | ||| || | || || |||||||||| ||||||| Sbjct 253549 TCTTGGCCTTTACGTTGTCGATAGTATCCGACGACTCGACCTCAAGTGTAATGGTCTTTC 253608 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||| | || || ||||| |||||||| Sbjct 253609 CGGTCAAAGTCTTCACAAAGATCTGCAT 253636 Score = 150 bits (166), Expect = 5e-31 Identities = 158/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| |||||||| ||||| || || || || ||||| || | || || ||||| || | Sbjct 252926 CAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCCA 252985 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 || |||||||||||||| | ||| || |||||||| || || ||||| || ||||| | Sbjct 252986 ACTGCTTTCCAGCAAAGATCAAACGCTGTTGATCAGGGGGTATGCCTTCCTTGTCCTGGA 253045 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || || || ||||| | || || | ||||| ||||| |||| ||||||| Sbjct 253046 TCTTGGCCTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCAAGAGTAATGGTCTTTC 253105 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||| || || || |||||||| ||||| Sbjct 253106 CGGTGAGCGTCTTGACAAAAATTTGCAT 253133 Score = 129 bits (142), Expect = 2e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| ||||| | | || ||||| |||||||| || || || ||||| || || || Sbjct 253634 CATACCGCCACGGAGACGGAGGACAAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTC 253693 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 |||| || || ||||| ||||| || ||||||||||| || | ||||| || || || Sbjct 253694 CGATAGGGTACGACCATCCTCAAGCTGCTTTCCAGCAAAAATCAATCGTTGTTGGTCGGG 253753 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || ||||| || ||||| || || || || || ||||| || | |||| | || Sbjct 253754 CGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTATCGATGGTGTCAGGCGACTC 253813 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||| || || || || || || ||||| ||||| Sbjct 253814 GACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATTTGCAT 253864 >seq1627 Length=307702 Score = 165 bits (182), Expect = 2e-35 Identities = 274/396 (69%), Gaps = 0/396 (0%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 ||||| ||| |||| || |||||| | | || ||||| |||| |||||| || ||| | Sbjct 222022 CCCGAGGAAGTTTCTTCCATGGTTCTCTTGAAGATGAAAGAAACTGCTGAGGCCTATCTT 221963 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 |||| || | | ||||| | || || || ||||| || |||||| |||| ||| Sbjct 221962 GGTGGTACCATCCAGAACGCTGTCGTCACCGTCCCTGCCTACTTCAATGATTCCCAACGT 221903 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 ||||| || || || || | |||| | || | || ||||| | || || || || Sbjct 221902 CAGGCAACCAAGGACGCCGGAACCATTTCTGGTCTCAACGTTCTCCGTATCATCAACGAG 221843 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 || ||||| || || ||||| || || || || || | | | | || || || Sbjct 221842 CCTACTGCCGCTGCCATTGCCTACGGTCTCGACAAGAAGGTTCAGGGCGAGCGTAACGTT 221783 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 || || || ||| | || || || || |||||||| || || | || ||||||| || Sbjct 221782 CTCATCTTCGATCTCGGGGGAGGAACCTTTGATGTCTCCCTCTTGACCATTGAAGAAGGT 221723 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891 || || || || || || || ||||||||||| || |||||||| || || |||||||| Sbjct 221722 ATCTTCGAGGTCAAGGCCACCGCTGGTGATACTCACCTTGGTGGTGAGGACTTTGATAAC 221663 Query 349892 CGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGT 349927 |||||||| || || || |||| || |||||| Sbjct 221662 CGTCTCGTCAATCACTTCGTCCAAGAGTTCAAGCGT 221627 Score = 96.9 bits (106), Expect = 1e-14 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 349231 TTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAG 349290 ||| |||| ||| ||||||||||| || || ||||| || || ||||| ||||||||| | Sbjct 222425 TTGCGTTGGTGTCTGGCAAAATGACCGAGTCGAAATCATCGCCAATGACCAAGGTAACCG 222366 Query 349291 AACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGATTCTGCAAA 349350 ||| ||||| || ||||| | || | || || |||||| | || |||||| | ||||| Sbjct 222365 AACGACGCCTTCGTACGTCTCCTTCTCGGACACGGAGCGTCTCATCGGTGATGCCGCAAA 222306 Query 349351 AAATCA 349356 || || Sbjct 222305 GAACCA 222300 >seq2206 Length=69542 Score = 163 bits (180), Expect = 9e-35 Identities = 177/235 (75%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || || ||||| ||||||||||||||||| || | Sbjct 41274 TTTGCATACCACCACGGAGACGAAGCACGAGGTGAAGTGTAGACTCTTTTTGAATGTTGT 41333 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | ||||| | || || || || || ||||| || ||||| ||||| ||||||||||| | Sbjct 41334 AGTCAGAAAGAGTACGACCGTCCTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGCTGGT 41393 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||||||||| ||||| || |||||||| || || || ||||| || || | || || | Sbjct 41394 CAGGAGGAATGCCTTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAAG 41453 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | || | ||||| || || || || || || || |||||||| Sbjct 41454 ACTCCACCTCCAAAGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 41508 Score = 136 bits (150), Expect = 1e-26 Identities = 155/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| || ||||||||||| || ||||| ||||| || || | || ||||||||||| | Sbjct 41073 CAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCGGAAAGAGTACGCCCATCTTCGA 41132 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || || || || || ||||| || || || |||||||||||||| || ||||||| Sbjct 41133 GCTGCTTCCCGGCGAAAATGAGACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCCTGAA 41192 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || || || ||||| | || || | || || || || |||| ||||| | Sbjct 41193 TCTTTGCCTTCACGTTGTCAATGGTGTCGGACGACTCGACCTCCAGGGTAATCGTCTTAC 41252 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || || || || || ||||| Sbjct 41253 CCGTGAGGGTCTTGACGAAGATTTGCAT 41280 Score = 84.2 bits (92), Expect = 7e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| ||||| | | || || || ||||| |||||||| || ||||| || || || Sbjct 41506 CATACCGCCACGGAGACGAAGGACGAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTC 41565 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || |||||||| ||||| || || || ||||| | || || || ||||| Sbjct 41566 GGACAGAGTACGGCCATCTTCCAGTTGCTTCCCCGCGAAGATCAAGCGCTGTTGGTCAGG 41625 Query 140627 AGGAAT 140632 |||||| Sbjct 41626 AGGAAT 41631 >seq1565 Length=138234 Score = 105 bits (116), Expect = 2e-17 Identities = 183/262 (70%), Gaps = 3/262 (1%) Strand=Plus/Minus Query 349632 ATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATG 349691 |||| || ||||| ||| | || || || ||||| || ||||| || || | || | Sbjct 69387 ATTTCAACGATGCGCAGAGGCAAGCCACCAAGGATGCCGGAAGCATCGCTGGACTCAACG 69328 Query 349692 TTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGA 349751 |||| | |||| || |||||||| ||||| || |||| ||||| ||||| | | | Sbjct 69327 TTCTTCGTGTGATGAACGAACCCACGGCTGCTGCCCTTGCCTATGGTCTTGACCAGAA-A 69269 Query 349752 GTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCAC 349811 | ||||| ||| || || || ||| |||||| || || || ||||| || || || | Sbjct 69268 G-GACCA-GAATCGAAGGTTATTGTTTATGATTTGGGCGGAGGAACTTTCGACGTTTCTC 69211 Query 349812 TACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTG 349871 | || || | ||||| || | || || || || ||||| || || || || |||| Sbjct 69210 TCCTTTCAGTCGAAGATGGTGTATTCGAGGTACTCGCCACTGCAGGAGACACGCACCTTG 69151 Query 349872 GTGGAGAAGATTTTGATAATCG 349893 ||||||| || ||||| || || Sbjct 69150 GTGGAGAGGACTTTGACAACCG 69129 >seq2370 Length=49093 Score = 96.9 bits (106), Expect = 1e-14 Identities = 85/105 (81%), Gaps = 1/105 (1%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| ||||| |||||||| || ||||| || || ||| | || || |||||||| | Sbjct 22863 CAAG-TGAAGGGTAGACTCCTTCTGAATGTTGTAGTCACTGAGAGTGCGGCCATCTTCGA 22921 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTC 140634 | ||||||||||||||||| ||||| ||||| ||||| ||||||| Sbjct 22922 GCTGTTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGAATTC 22966 >seq1528 Length=23516 Score = 95.1 bits (104), Expect = 4e-14 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 349766 aaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAA 349825 || ||||| || | ||||| ||| || || |||||| |||| || || | || ||||| Sbjct 359 AACATTCTCATCTCTGATTGAGGAGGAGGAACTTTTAATGTCTCCCTCTTGACTATTGAA 418 Query 349826 GAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTT 349885 ||| | || ||||| || || || |||||||||||||| || |||||||| | || ||| Sbjct 419 GAGAGTATCTTTGAGGTCAAGGCTACTGCTGGTGATACTCACCTTGGTGGTAAGGACTTT 478 Query 349886 GATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGC 349925 || | |||| || || ||||| |||| || |||| Sbjct 479 AATGACTGTCTTGTCAACCACTTTGTCCAAGAGTTCAAGC 518 >seq2286 Length=139373 Score = 87.8 bits (96), Expect = 5e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||||| ||||||| || || | ||| | ||| || || ||||| | ||| || ||||| Sbjct 67440 AGAACCAGATGAATCGTTGAATTTTTCTCAATGTTGTAGTCAGAAAGTGTACGTCCATCC 67499 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || | |||||||| || ||||| || || || | ||| ||||| ||||| | | |||| Sbjct 67500 TCCAACTGTTTTCCGGCGAAGATAAGTCGCTGTTCATCTGGAGGTATTCCATTTAGATCC 67559 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || | || | || || || | ||| || | ||||||| | ||| Sbjct 67560 TGTATCTTGACCTTGATCTTGTCGATAGTTTCAAGCGGCGCCGCTTCAAGGCGGATAGTC 67619 Query 140706 TTTCCGGTTAGTGTTTTTACAAA 140728 |||||||| ||||| || | ||| Sbjct 67620 TTTCCGGTGAGTGTCTTGATAAA 67642 >seq2402 Length=202812 Score = 84.2 bits (92), Expect = 7e-11 Identities = 83/106 (78%), Gaps = 1/106 (1%) Strand=Plus/Minus Query 140527 GAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTT 140586 || |||| |||||||| ||||| || || || || || ||| ||| || || ||||| | Sbjct 187446 GACCAAG-TGAAGAGTCGACTCCTTCTGGATGTTGTAGTCACTTAAAGTACGACCATCCT 187388 Query 140587 CAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAAT 140632 | || || ||||||||||| || |||||||| ||||| || ||||| Sbjct 187387 CGAGCTGCTTTCCAGCAAATATGAGACGTTGTTGATCGGGGGGAAT 187342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515204757898271