Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1573 120 3e-22 seq2123 111 2e-19 >seq1573 Length=133326 Score = 120 bits (132), Expect = 3e-22 Identities = 355/553 (64%), Gaps = 52/553 (9%) Strand=Plus/Minus Query 79387 AAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCC 79446 ||||| || |||||||| || || ||| | ||| ||| ||| | ||||| | ||| Sbjct 58606 AAGAGATCAGGGATCCAAAGAGCGTAGAATAAGTCACGGGCACGGACTTCCTCCTTGCCA 58547 Query 79447 TGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATG 79506 |||||| | || || | ||| | | ||||||||||||||||||||| | ||| ||| Sbjct 58546 TGGTTCTTCCTAAGGTCAATGAAGGCGAAGATGTCGGCGTGCCACGGCTCAATATACATG 58487 Query 79507 GCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAA 79566 || || | ||| |||||| ||| || |||| |||||| ||||| || | || Sbjct 58486 GCAAATGCACCTGGACGCTTGTTGCCTCCTTGGTCGACGTAACGGGCGGTAGCATCATAA 58427 Query 79567 ACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCC------GT-------- 79612 |||| ||||||||||| || || | | | ||| || || || || Sbjct 58426 GCTCGAAGCATGGGCACTATACCATTTGAGTAGCCATTGGTTCCAGCAATGTAGGATCTA 58367 Query 79613 -TGATT--------CGTGTAC-------------------CGC--------TCGCCCGAA 79636 |||| ||| ||| ||| | || || | Sbjct 58366 GTGATGAAGATCAGCGTATACGACAGCAAGAAGTGACAAGCGCATACCCAGTAGCGCGGA 58307 Query 79637 TGTTCGAGCA-GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTG 79695 |||| | | | ||| | || || || || | |||||| ||| ||||| ||||| Sbjct 58306 TGTT-GTGAATGTGAAGGCCAATACCACCAGCACACTTGCTGATCATAGCGCATTCCTTA 58248 Query 79696 AGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGAC 79755 || || ||||||||||| || || |||||||||||||| ||||| ||||| || || Sbjct 58247 AGAGTATCGTAGATGCCTTCTATTGAGTCGTCCTTCATGGCGACGAGGAAACACGAAGAG 58188 Query 79756 ATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTT 79815 | ||| | | ||||||||||||||||| || || | ||||| |||||| || | Sbjct 58187 AGCTGAGCATGAGGTGTACCGGCGTTGAAGAGAGTTGGGGATGCGTGAGTGAAGTACCTC 58128 Query 79816 TGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACC 79875 | ||| ||||| ||||| | || ||| || ||| |||||||||||| || Sbjct 58127 TCAGACATGAGATCATACGTTTGGAGAACTCGCTCGATGTCACGGCCGTGGATGCCAACG 58068 Query 79876 GCGACGCGCATGA 79888 ||| ||||||| Sbjct 58067 GCGCAACGCATGA 58055 Score = 104 bits (114), Expect = 3e-17 Identities = 164/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||||| ||| || |||||||| ||| ||| || |||||| | | | || || | Sbjct 58055 TCATGCGTTGCGCCGTTGGCATCCACGGCCGTGACATCGAGCGAGTTCTCCAAACGTATG 58114 Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235 | || ||| ||| || |||||| ||||| | || || || |||||||||||||| Sbjct 58115 ATCTCATGTCTGAGAGGTACTTCACTCACGCATCCCCAACTCTCTTCAACGCCGGTACAC 58174 Query 19236 ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCA 19295 | | ||| | || |||||||| || || |||||||| ||| || || |||| Sbjct 58175 CTCATGCTCAGCTCTCTTCGTGTTTCCTCGTCGCCATGAAGGACGACTCAATAGAAGGCA 58234 Query 19296 TCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGG 19350 ||||||| || || ||||| ||||| ||| |||||| | || ||||| || Sbjct 58235 TCTACGATACTCTTAAGGAATGCGCTATGATCAGCAAGTGTGCTGGTGGTATTGG 58289 Score = 91.5 bits (100), Expect = 2e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 |||||||| || ||||| | ||||||||||||||| || | |||||| || | || || Sbjct 59960 TAGTACATCCCGGTCTTCAAACCCTTCTTCCATCCATAGAAGTGCATGCTAGTCAACTGA 59901 Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318 ||| | || | ||| | | |||||| ||| |||| ||| | |||||| Sbjct 59900 CCCATCGTTGGTGCCGCCAGGTGAACGTTGAGACTCTGACTCTGGCAGATAAAGGCACCG 59841 Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAAATG 78378 ||||| || || | ||| | |||| ||| || | |||||||||| ||| ||||||| Sbjct 59840 CGGTCAGCAGCGAGGTCCAGGACCTTCTTCTGGGAGATCTCCCAGACAGTCTTGTAAATG 59781 Query 78379 GCCTT 78383 ||||| Sbjct 59780 GCCTT 59776 >seq2123 Length=425399 Score = 111 bits (122), Expect = 2e-19 Identities = 338/514 (66%), Gaps = 20/514 (4%) Strand=Plus/Minus Query 59613 TCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAG-ACCTGAAGGATTGGGACAAGCT 59671 ||||||||| ||| ||| ||||| || || | || || || || | || ||| |||| | Sbjct 272172 TCATTCTGGACCGCCGAAGAGATGGATCT-GTCGAAGGACTTGCACGACTGGAACAACCG 272114 Query 59672 CAATTACGA---CGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGA 59728 || |||| ||||| ||||||||| ||||| || |||||||| || ||| Sbjct 272113 CATGAACGAAAACGAGCGTCATTTCATCTCACACGTCCTCGCATTCTTCGCCGCTTCTGA 272054 Query 59729 TGGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATGTCCAGATTGCCGAGGC 59788 ||| ||||| | || ||| | | | | || || || || || ||| ||| || || Sbjct 272053 TGGGATTGTCAACGAGAATCTCGTCGAGCGTTTCTCTAATGAAGTGCAGGCTGCTGAAGC 271994 Query 59789 CCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCT 59848 |||| ||||||| || || | | ||| || ||||| || || ||||| || Sbjct 271993 GCGGTGCTTCTACGGGTTCCAAATCATGATGGAGAACATTCACTCTGAAACATACTCACT 271934 Query 59849 CATGATCGATAAGTTGGTCAAGGATCCGG----AAGAGAAGGCTGGTCTGTTCCGTGCCA 59904 | | ||||| | | | || ||| | | | ||| | || ||| |||| Sbjct 271933 CCTCATCGACACCTACATTAAAGATGCTCGCCAACGGGAACAC----CTCTTCGATGCCG 271878 Query 59905 TAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGAT----GAG 59959 | || || ||||| || || || | || || || ||||| | | ||||| || Sbjct 271877 TTGAAACCATCCCCTGC-GTCAAGCGCAAGGCCGACTGGGCTCTTCGATGGATCTCCGAT 271819 Query 59960 TCCTGGAGCATCATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTT 60019 | | ||| |||| | ||||| | || || || ||| || || |||||||| Sbjct 271818 ACACGCTCGATC-TTTGGTGAGCGTCTGGTTGCCTTCGCTGCCGTCGAGGGTATCTTCTT 271760 Query 60020 CTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAG 60079 ||| || |||||| ||||||||||||| | || |||||||| | ||||| || ||| Sbjct 271759 CTCGGGGTCGTTCGCTGCTATTTTCTGGATGAAGAAGCGTGGTTTGATGCCCGGATTGAC 271700 Query 60080 TTTCTCCAACGAGCTGATTTCCCGGGACGAGGGC 60113 |||||||| || || ||| ||| ||||||||| Sbjct 271699 GTTCTCCAATGAACTCATTAGCCGTGACGAGGGC 271666 Score = 84.2 bits (92), Expect = 2e-11 Identities = 114/154 (74%), Gaps = 5/154 (3%) Strand=Plus/Minus Query 60276 CAGTACATTCAGTTTGTCGCGGACCGCCT-CATGGCCCAGTTTGGAGAAGGACCAATT-T 60333 |||||||| |||||||||| |||||||| | || || |||| || ||| | | | Sbjct 271451 CAGTACATCGAGTTTGTCGCCGACCGCCTGCTTGTTGCA--TTGGGTAACGACAAGGTCT 271394 Query 60334 ACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACT 60393 || | | ||||| ||||||| ||||| | |||||| || | || |||||||||| Sbjct 271393 ACAACAGCACGAACCCCTTCGACTTCATGGATATGATCTCGCTGCAGGGCAAGACCAACT 271334 Query 60394 TCTTTGAGAAGCGGGTCGGGGATTA-TTCAAAGC 60426 ||||||||||||| ||| ||| || | |||||| Sbjct 271333 TCTTTGAGAAGCGTGTCTCGGACTACTCCAAAGC 271300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548507267776080