Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq2206 185 2e-41 seq1986 176 1e-38 seq2370 98.7 2e-15 seq2402 95.1 3e-14 >seq2206 Length=69542 Score = 185 bits (204), Expect = 2e-41 Identities = 168/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||| || ||||||||||| ||||| || || | ||| || | || || Sbjct 41297 AGCACGAGGTGAAGTGTAGACTCTTTTTGAATGTTGTAGTCAGAAAGAGTACGACCGTCC 41356 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| |||||||| || ||||| ||||||||||||| |||||||||||| Sbjct 41357 TCGAGTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 41416 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| ||||| || ||||||||||| || || ||||| | |||||||||| Sbjct 41417 TGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCCACCTCCAAAGTGATCGTC 41476 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| ||||| || || | |||||| Sbjct 41477 TTACCCGTGAGGGTCTTGACGAAGATCTGCAT 41508 Score = 181 bits (200), Expect = 2e-40 Identities = 165/208 (79%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 ||||||| ||||| ||||| || || |||||||| || | ||| || | |||||||| | Sbjct 41073 CAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCGGAAAGAGTACGCCCATCTTCGA 41132 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 ||||||| || ||||| || || || |||||||| ||||||| ||||||||||||||| | Sbjct 41133 GCTGCTTCCCGGCGAAAATGAGACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCCTGAA 41192 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 ||||| |||||||| || |||||||| || || ||||| || || |||||||| | Sbjct 41193 TCTTTGCCTTCACGTTGTCAATGGTGTCGGACGACTCGACCTCCAGGGTAATCGTCTTAC 41252 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||||| ||||| || || | ||||| Sbjct 41253 CCGTGAGGGTCTTGACGAAGATTTGCAT 41280 Score = 96.9 bits (106), Expect = 8e-15 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| || ||||| || || ||||| || || | || || | |||||| Sbjct 41525 AGGACGAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCT 41584 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008 ||||| ||||| || |||||||| | ||| |||||||||||||||| Sbjct 41585 TCCAGTTGCTTCCCCGCGAAGATCAAGCGCTGTTGGTCAGGAGGAA 41630 >seq1986 Length=559288 Score = 176 bits (194), Expect = 1e-38 Identities = 174/225 (77%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || |||||| | |||||||||||||| || |||||||| |||||||||||||| | || Sbjct 253137 TCCACGAAGACGGAGGACAAGGTGAAGGGTCGACTCTTTCTGGATGTTATAATCGGAGAG 253196 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 ||| | |||||||| ||||| || || || || ||||| ||||| |||||||| || | Sbjct 253197 GGTACGGCCATCTTCGAGCTGTTTTCCAGCAAAAATAAGACGTTGCTGGTCAGGGGGGAT 253256 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 |||||||||||||| ||||| || || || ||||||||||| || || || || Sbjct 253257 GCCTTCCTTGTCCTGAATCTTGGCCTTTACATTGTCGATGGTGTCCGAAGACTCGACTTC 253316 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || ||||| ||||| || | |||||| || || | ||||| Sbjct 253317 GAGCGTTATCGTTTTTCCGGTTAAAGTCTTCACGAAGATTTGCAT 253361 Score = 176 bits (194), Expect = 1e-38 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||||||||||||||| || || || ||||| || |||| ||||| | ||||| Sbjct 253653 AGGACAAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCCGATAGGGTACGACCATCC 253712 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || || || || | ||||||||||| || || | |||||||||||| Sbjct 253713 TCAAGCTGCTTTCCAGCAAAAATCAATCGTTGTTGGTCGGGCGGGATGCCTTCCTTGTCC 253772 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||||||||||| || |||||||||||||| ||| Sbjct 253773 TGGATCTTGGCCTTGACGTTATCGATGGTGTCAGGCGACTCGACCTCGAGAGTGATGGTC 253832 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | ||||| Sbjct 253833 TTGCCAGTGAGGGTCTTGACGAAAATTTGCAT 253864 Score = 172 bits (190), Expect = 1e-37 Identities = 163/208 (78%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 ||||||||||||| ||||| || |||||||| ||||||| || || | ||||| |||| Sbjct 252926 CAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCCA 252985 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 |||||| || || ||||| | || ||||| ||||| || | |||||||||||||||| Sbjct 252986 ACTGCTTTCCAGCAAAGATCAAACGCTGTTGATCAGGGGGTATGCCTTCCTTGTCCTGGA 253045 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 |||| || ||||| || |||||||| || |||||||| ||||| || ||||||| Sbjct 253046 TCTTGGCCTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCAAGAGTAATGGTCTTTC 253105 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 | ||||| ||||| ||||| | ||||| Sbjct 253106 CGGTGAGCGTCTTGACAAAAATTTGCAT 253133 Score = 172 bits (190), Expect = 1e-37 Identities = 163/208 (78%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 ||||||||||||| ||||| || |||||||| ||||| | ||||| | |||||||| | Sbjct 253429 CAAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAATCGGAGAGGGTACGACCATCTTCGA 253488 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 ||||||| || ||||| ||||| ||||| |||||||| || | || ||||||||||||| Sbjct 253489 GCTGCTTTCCAGCGAAAATAAGACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGA 253548 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 |||| || ||||| ||||| || || || || ||||| || || || ||||||| Sbjct 253549 TCTTGGCCTTTACGTTGTCGATAGTATCCGACGACTCGACCTCAAGTGTAATGGTCTTTC 253608 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 | || | |||||| ||||| | |||||| Sbjct 253609 CGGTCAAAGTCTTCACAAAGATCTGCAT 253636 >seq2370 Length=49093 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 ||||||||||||||||| || ||| || || ||||||||||| ||| |||||||||| Sbjct 23018 CCTTCCTTGTCCTGGATTTTGGCTTTGACATTGTCGATGGTGTCTGAGGATTCAACCTCG 23077 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || |||||||| || || || || | |||||| Sbjct 23078 AGAGTAATGGTTTTACCCGTGAGGGTTTTGACGAAAATCTGCAT 23121 >seq2402 Length=202812 Score = 95.1 bits (104), Expect = 3e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || || |||||||||||||| || || || |||||||||||||| ||| ||||| Sbjct 187282 CCCTCTTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGACGATTCCACCTCA 187223 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||||||||| |||||||| ||||| || || | |||||| || Sbjct 187222 AGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCATCTT 187176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159114024369305