Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq2416 187 2e-42 seq2123 114 1e-20 >seq2416 Length=74831 Score = 187 bits (206), Expect = 2e-42 Identities = 366/536 (68%), Gaps = 9/536 (2%) Strand=Plus/Minus Query 4563 TGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCT 4622 |||| || ||||| | ||| || || || || || || || || || ||||| | ||| Sbjct 67236 TGCATGCCCTCGTCACGGCTGATGAGCTCATTGGAGAAGGTCAAGCCAGGCATCAGCCCT 67177 Query 4623 CTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCG 4682 | ||| || | ||| || || ||||| ||||| || || ||||| ||||||||||| || Sbjct 67176 CGCTTCTTCATCCAGAAGATGGCGGCGAATGAACCGGAGAAGAAAATGCCTTCTACCGCT 67117 Query 4683 GCAAACGCTACTAATCGGGACCCGAACGA-GCTGGCTTTGTCTTTAATCCATTTTAATGC 4741 |||||||| || | || ||||| | | |||| ||| |||||| | || Sbjct 67116 GCAAACGCGACAAGGCGTTCACCGAATGTTGAACGCTT-GTCCGAGATCCATCGGAGAGC 67058 Query 4742 CCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATT--TACTT 4799 ||||| ||| || ||| || || ||||| || | | ||| | || | | | Sbjct 67057 CCAGTCAGCCTTACGCTTGACACAAGGAATGGTTTCAACAGCATCGAAGAGGTGTTCGCG 66998 Query 4800 TTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATA 4859 || || | ||||||| || || ||||| || || ||| || | || ||||| ||| Sbjct 66997 TTGTCGA--GGGTCTTTGATGTAGGTGTCGATGAGGAGGGAGTATGTCTCGGAATGAATA 66940 Query 4860 TTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTA 4919 ||||| || ||||| || ||||| || || | ||||| | | |||||||| || Sbjct 66939 TTTTCCATCATGATCTGGAAACCGTAGAAACAACGCGCTTCGGCGGCCTGAACTTCATTT 66880 Query 4920 CAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAA 4979 | || | ||| || | ||||||||| || || ||||| || || || || || | Sbjct 66879 GAGAAACGTTCCACGAGGTTTTCGTTAACAATGCCGTCTGAAGCGGCGAAGAAAGCGAGG 66820 Query 4980 ACATGAGATATAAAGTACTGTTCGT---CAGGCTTAAGTTTTTTCCAGTGGGGCAAATCT 5036 |||||||| || |||| | |||| || | | | || ||||||| | |||| ||| Sbjct 66819 ACATGAGAGATGAAGTGACGCTCGTTGTCATTCATGCGGTTGTTCCAGTCGTGCAAGTCT 66760 Query 5037 TTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACAT 5092 || | || ||| | |||||| ||||||| || || ||||| |||||||||||||| Sbjct 66759 TTGGATAGATCCATTTCTTCCGCAGTCCAGAATGATGCTTCTGCTTTTTTGTACAT 66704 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/175 (73%), Gaps = 8/175 (5%) Strand=Plus/Minus Query 4262 GTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCAT 4321 ||| || ||||||||||| |||||||| || || || |||| |||||||| | ||||| Sbjct 67592 GTAATCAGATACTCGCTTCTCGAAGAAGTTTGTCTTTCCTTGCAACGAAATCATGTCCAT 67533 Query 4322 AAAATCAAACGGATTAGTTGCGTTGTA-ATGTTTT--TCACACTTTAGAGCTACAAGCAA 4378 || || || || || || |||||| || || | | || | | ||| || |||| Sbjct 67532 GAAGTCGAAGGGGTTGGTGCTGTTGTAGATCTTGTCGTTACCC---AAAGCAACGAGCAG 67476 Query 4379 TCGGTCAGCTACAAATTCTATATACTGGCTCATGAG-TTCGCAGTTAATTCCAAT 4432 ||||| || ||||| || || ||||| | |||||| || || ||| ||||| || Sbjct 67475 GCGGTCGGCAACAAACTCGATGTACTGACACATGAGCTTAGC-GTTCATTCCGAT 67422 >seq2123 Length=425399 Score = 114 bits (126), Expect = 1e-20 Identities = 363/555 (65%), Gaps = 17/555 (3%) Strand=Plus/Plus Query 4548 CACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAAT 4607 || |||||||| |||| || ||||| | |||||| ||||| || || ||||| ||| Sbjct 271646 CAAGCAAAATCGGTGTGCATGCCCTCGTCACGGCTAATGAGTTCATTGGAGAACGTCAAT 271705 Query 4608 CCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAAT 4667 |||||||| ||||| | ||| || | ||| || ||||| || || ||||| || ||||| Sbjct 271706 CCGGGCATCAAACCACGCTTCTTCATCCAGAAAATAGCAGCGAACGACCCCGAGAAGAAG 271765 Query 4668 ATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGC-TTTGTCTTT 4726 || || || ||||| || || || || | | | | | || || | || | | || Sbjct 271766 ATACCCTCGACGGCAGCGAAGGCAACCAGAC-GCTCACCAAAGATCGAGCGTGTATCGGA 271824 Query 4727 AATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTT 4786 |||||| | ||||||| || || ||| ||||| || || || | | || | Sbjct 271825 GATCCATCGAAGAGCCCAGTCGGCCTTGCGCTTGACGCAGGGGATGGTTTCAACGGCATC 271884 Query 4787 AAATA--ATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATAC 4844 || | || | || | | | |||| ||| || ||||| || || || || Sbjct 271885 GAAGAGGTGTTCCCGTTGGCGA--GCATCTTTAATGTAGGTGTCGATGAGGAGTGAGTAT 271942 Query 4845 ATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTT 4904 ||||||| || || || || || || || || ||||| ||||| | ||||| | Sbjct 271943 GTTTCAGAGTGAATGTTCTCCATCATGATTTGGAACCCGTAGAAGCACCGCGCTTCAGCA 272002 Query 4905 ACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCT 4964 | || ||||| ||| | || | || || | || ||||| || || || ||| || Sbjct 272003 GCCTGCACTTCATTAGAGAAACGCTCGACGAGATTCTCGTTGACAATCCCATCAGAAGCG 272062 Query 4965 GCAAAAAACGCCAAAACATGAGATAT-AAAGTAC-----TGTTCG-TCAGGCTTAAGTTT 5017 || || || || | || || || || ||| || | |||| ||| || | || Sbjct 272063 GCGAAGAATGCGAGGACGTGTGAGATGAAATGACGCTCGTTTTCGTTCATGC----GGTT 272118 Query 5018 TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTC 5077 ||||||| | |||| || || | | ||| | ||||| | ||||| || || ||||| Sbjct 272119 GTTCCAGTCGTGCAAGTCCTTCGACAGATCCATCTCTTCGGCGGTCCAGAATGAGGCTTC 272178 Query 5078 CGCTTTTTTGTACAT 5092 || || |||||||| Sbjct 272179 GGCCTTCTTGTACAT 272193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427036291666481