Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2416 156 6e-33 seq2123 131 2e-25 >seq2416 Length=74831 Score = 156 bits (172), Expect = 6e-33 Identities = 348/519 (67%), Gaps = 14/519 (3%) Strand=Plus/Minus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 || || || || || | || ||||| || || || || || | ||| || || || ||| Sbjct 67209 TCATTGGAGAAGGTCAAGCCAGGCATCAGCCCTCGCTTCTTCATCCAGAAGATGGCGGCG 67150 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 || || || || ||||| ||||||||||| || ||||| ||| ||| | || ||| | Sbjct 67149 AATGAACCGGAGAAGAAAATGCCTTCTACCGCTGCAAACGCGACAAGGCGTTCACCGAAT 67090 Query 48303 CTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 | | |||| ||||| || | ||||| |||||||| ||| |||||||| Sbjct 67089 GTTGAACGCTTGTCCGAGATCCATCGGAGAGCCCAGTCAGCCTTACGCTTGACACAAGGA 67030 Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTG-CTA---TCTTTAACGTAAGT 48415 || ||||| | ||||| ||||| | || | ||| | | ||||| | ||| || Sbjct 67029 ATGGTTTCAACAGCATCGAAGAGG----TGTTCGCGTTGTCGAGGGTCTTTGATGTAGGT 66974 Query 48416 ATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTA 48475 || || | || || | ||||| ||||||||||| || ||||| || ||||| Sbjct 66973 GTCGATGAGGAGGGAGTATGTCTCGGAATGAATATTTTCCATCATGATCTGGAAACCGTA 66914 Query 48476 AAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATT 48535 ||||| | |||||| | | ||| || || | | || ||||| | | || || || Sbjct 66913 GAAACAACGCGCTTCGGCGGCCTGAACTTCATTTGAGAAACGTTCCACGAGGTTTTCGTT 66854 Query 48536 TACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTT 48595 || || || || ||| || || || || | ||||| || || | ||||| Sbjct 66853 AACAATGCCGTCTGAAGCGGCGAAGAAAGCGAGGACATGAGAGATGAAGTGACGCTCGTT 66794 Query 48596 GGAAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGT 48652 | | ||| | || |||||||| | | ||||| |||| ||| | |||||| || || Sbjct 66793 GTCATTCATGCGGTTGTTCCAGTCGTGCAAGTCTTTGGATAGATCCATTTCTTCCGCAGT 66734 Query 48653 CCAAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 ||| |||||||| ||||||||||| ||||| | ||| || Sbjct 66733 CCAGAATGATGCTTCTGCTTTTTTGTACATTTGCCAGAT 66695 >seq2123 Length=425399 Score = 131 bits (144), Expect = 2e-25 Identities = 362/554 (65%), Gaps = 6/554 (1%) Strand=Plus/Minus Query 48144 GCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCG 48203 ||||| || ||| | ||||| || | ||| || |||||||| ||| | || || || Sbjct 273857 GCAAACTCTGTATGTAACCCTTCGTCACGACTGATCAATTCGTTGGAATAGGTCAGTCCT 273798 Query 48204 GGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATG 48263 ||||| || || || || || | ||||||||| | || || || || || || || || Sbjct 273797 GGCATAAGACCTCGCTTCTTTATCCAAAATATGGAAGCAAAGGAGCCGGAGAAAAAGATT 273738 Query 48264 CCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTG---TATC 48320 || || || || || || || | | || | || | || || | |||| Sbjct 273737 CCCTCCACCGCAGCGAAAGCCACCAAACGTTCAGCAAAAGATGTTTGTTTATCCGATATC 273678 Query 48321 CACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAG 48380 || || |||||| ||||||||| | ||||| || |||||||| || | ||| Sbjct 273677 CAGCGGATTGCCCAGTCAGCCTTCCGTCGGATGCAAGGAATGGTTTCTATCGCGTCAAAC 273618 Query 48381 AGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCG 48440 ||| | | ||| | ||||| | ||| || ||||| | |||| || ||| Sbjct 273617 AGATATTGCCGTTCGGTTGGGTCTTTGATGTAGGTGTCTATGAGAAGAGAGTATGCCTCG 273558 Query 48441 GAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGT 48500 ||||| || ||||| || || || || || |||||||||| |||||||| | || Sbjct 273557 GAGTGGATGTTTTCCATCATAATTTGGAAACCATAAAAACATCGCGCTTCTGCCACTTGC 273498 Query 48501 ACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAA 48560 ||||| | |||| ||||| | | ||||| || ||||||||||| ||||| || Sbjct 273497 ACCTCGTTTGAAAACCGTTCTACTAGGTTCTCGTTCACTATTCCATCTGACGCAGCGAAG 273438 Query 48561 AATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCA---GTTTATTCCAGTCA 48617 || || | || | | |||||| ||| || | | | | |||||||| Sbjct 273437 AAAGCAAGAACCCGGGATACGAAATATCGTTCACTGTCGTTTAAACGGTGGTTCCAGTCC 273378 Query 48618 TTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTA 48677 | | || || |||| |||| |||||| || ||||| ||||| || |||||| ||| Sbjct 273377 ATCAAGTCGTTAGATAAGTCTATTTCTTCGGCAGTCCAGAATGACGCTTCTGCTCGTTTG 273318 Query 48678 TACATATTCCATAT 48691 ||||| |||||| Sbjct 273317 TACATTCGCCATAT 273304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694646596648480