Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1986 136 9e-27 seq2206 127 5e-24 >seq1986 Length=559288 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||||||||| ||||| || |||||||| |||||||| ||||||| | || | ||||| Sbjct 253149 GAGGACAAGGTGAAGGGTCGACTCTTTCTGGATGTTATAATCGGAGAGGGTACGGCCATC 253208 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || ||| || || || ||||| | |||||||| | | ||| |||||||| || Sbjct 253209 TTCGAGCTGTTTTCCAGCAAAAATAAGACGTTGCTGGTCAGGGGGGATGCCTTCCTTGTC 253268 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||||| || || ||| | || | | |||| ||| ||| ||||| || || || || Sbjct 253269 CTGAATCTTGGCCTTTACATTGTCGATGGTGTCCGAAGACTCGACTTCGAGCGTTATCGT 253328 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || || | |||||||||||||| ||||| Sbjct 253329 TTTTCCGGTTAAAGTCTTCACGAAGATTTGCAT 253361 Score = 107 bits (118), Expect = 4e-18 Identities = 151/210 (72%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| ||||| || |||||||||||||||| | || | |||||||| | Sbjct 253429 CAAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAATCGGAGAGGGTACGACCATCTTCGA 253488 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| || ||||| ||||| | |||||||| | | ||| || ||||| || || Sbjct 253489 GCTGCTTT--CCAGCGAAAATAAGACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCCTG 253546 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || || || || | || | | || || ||| || ||||| ||||| || || Sbjct 253547 GATCTTGGCCTTTACGTTGTCGATAGTATCCGACGACTCGACCTCAAGTGTAATGGTCTT 253606 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || | ||||||||| |||| |||||| Sbjct 253607 TCCGGTCAAAGTCTTCACAAAGATCTGCAT 253636 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/210 (71%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| ||||| || |||||||||||||| | | ||| | ||||| || | Sbjct 252926 CAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCCA 252985 Query 151957 --GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 ||||| || || ||||| | | ||| || || | | || |||||||| || || Sbjct 252986 ACTGCTTT--CCAGCAAAGATCAAACGCTGTTGATCAGGGGGTATGCCTTCCTTGTCCTG 253043 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || || ||||| | || | | |||| ||| ||| || ||||||||||| || || Sbjct 253044 GATCTTGGCCTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCAAGAGTAATGGTCTT 253103 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| ||||| || || | ||||| Sbjct 253104 TCCGGTGAGCGTCTTGACAAAAATTTGCAT 253133 >seq2206 Length=69542 Score = 127 bits (140), Expect = 5e-24 Identities = 153/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||||||||| || || ||||| || |||| | ||| | ||||||||| | Sbjct 41073 CAAGGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCGGAAAGAGTACGCCCATCTTCGA 41132 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||||||||||| || || | ||| ||||| | | ||||||||||| || |||| Sbjct 41133 GCTGCTTCCCGGCGAAAATGAGACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCCTGAA 41192 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| || || | || | | |||| || ||| || || || ||||| || || | Sbjct 41193 TCTTTGCCTTCACGTTGTCAATGGTGTCGGACGACTCGACCTCCAGGGTAATCGTCTTAC 41252 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||| ||||| ||||||| ||||| Sbjct 41253 CCGTGAGGGTCTTGACGAAGATTTGCAT 41280 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || ||||| |||||||||||||| |||||||| || | | ||| | || || Sbjct 41297 AGCACGAGGTGAAGTGTAGACTCTTTTTGAATGTTGTAGTCAGAAAGAGTACGACCGTCC 41356 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || |||||||| || | |||||||| | | || |||||||| || Sbjct 41357 TCGAGTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 41416 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || ||| | || | | |||| ||| ||| || || | ||| || || Sbjct 41417 TGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCCACCTCCAAAGTGATCGTC 41476 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| ||||| ||||||| |||||| Sbjct 41477 TTACCCGTGAGGGTCTTGACGAAGATCTGCAT 41508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153782999027747