Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq2206 181 2e-40 seq1986 163 6e-35 seq2402 95.1 3e-14 >seq2206 Length=69542 Score = 181 bits (200), Expect = 2e-40 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || || || | || |||||||| ||||||||||||| Sbjct 41281 ACCACCACGGAGACGAAGCACGAGGTGAAGTGTAGACTCTTTTTGAATGTTGTAGTCAGA 41340 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || || || ||||| ||||| || || || ||||||| |||||| |||||| || Sbjct 41341 AAGAGTACGACCGTCCTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCAGGAGG 41400 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| || ||||| || || || | ||||| ||||| |||| || || Sbjct 41401 AATGCCTTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCCAC 41460 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | |||||||||||||||||| | ||||| ||||| |||||||| Sbjct 41461 CTCCAAAGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 41508 Score = 138 bits (152), Expect = 2e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || || ||||| ||||| | ||| || || ||||| || || || |||||||| || Sbjct 41090 TCCTTCTGAATGTTATAGTCGGAAAGAGTACGCCCATCTTCGAGCTGCTTCCCGGCGAAA 41149 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | ||| |||||||| ||||| || |||||||| || |||||||| || ||| | Sbjct 41150 ATGAGACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCCTGAATCTTTGCCTTCACGTTG 41209 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||||| || | ||||| || || || |||||||||||||| | ||||| ||| Sbjct 41210 TCAATGGTGTCGGACGACTCGACCTCCAGGGTAATCGTCTTACCCGTGAGGGTCTTGACG 41269 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 41270 AAGATTTGCAT 41280 Score = 100 bits (110), Expect = 6e-16 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 |||||||||||||| || |||||||| || | ||||| ||||| |||| || || ||| Sbjct 41689 CCCTCCTTGTCTTGAATTTTTGCTTTGACATTGTCGATGGTGTCAGAAGACTCAACCTCG 41748 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || ||||| ||||| || ||||| || || ||||| ||||||||| Sbjct 41749 AGGGTGATGGTCTTTCCGGTCAAGGTTTTGACGAAGATCTGCATT 41793 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || ||||| || || || | || || || || ||||||||||| | Sbjct 41509 ACCGCCACGGAGACGAAGGACGAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGA 41568 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || |||||||| || ||||| ||||| || |||||||| || ||||||||| || Sbjct 41569 CAGAGTACGGCCATCTTCCAGTTGCTTCCCCGCGAAGATCAAGCGCTGTTGGTCAGGAGG 41628 Query 282992 AATAC 282996 ||||| Sbjct 41629 AATAC 41633 >seq1986 Length=559288 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || || || || | ||| ||| || || ||||||||||| | Sbjct 253637 ACCGCCACGGAGACGGAGGACAAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCCGA 253696 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || |||||||| || || || || ||||| ||||| ||||||||||| ||| Sbjct 253697 TAGGGTACGACCATCCTCAAGCTGCTTTCCAGCAAAAATCAATCGTTGTTGGTCGGGCGG 253756 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || |||||||| |||||||| || || ||| ||||||| ||||| | | ||||| Sbjct 253757 GATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTATCGATGGTGTCAGGCGACTCGAC 253816 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||||||||| ||||| || || | ||||| ||||| || ||||| Sbjct 253817 CTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATTTGCAT 253864 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || || || || | || ||||| |||||||| || || | Sbjct 253135 CCTCCACGAAGACGGAGGACAAGGTGAAGGGTCGACTCTTTCTGGATGTTATAATCGGAG 253194 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || |||||||| || || ||||| || ||||| || | |||||| |||||| || Sbjct 253195 AGGGTACGGCCATCTTCGAGCTGTTTTCCAGCAAAAATAAGACGTTGCTGGTCAGGGGGG 253254 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || |||||||| || ||||| || ||||| | ||||| |||||||||| |||||| Sbjct 253255 ATGCCTTCCTTGTCCTGAATCTTGGCCTTTACATTGTCGATGGTGTCCGAAGACTCGACT 253314 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || ||||| || || || |||||||| ||||| || ||||| Sbjct 253315 TCGAGCGTTATCGTTTTTCCGGTTAAAGTCTTCACGAAGATTTGCAT 253361 Score = 150 bits (166), Expect = 4e-31 Identities = 148/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || ||||||||||| || | || || || ||||| || || || || || || || Sbjct 253446 TCCTTCTGGATGTTGTAATCGGAGAGGGTACGACCATCTTCGAGCTGCTTTCCAGCGAAA 253505 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | |||||| |||||| || |||||||||||||| |||||||| || |||||| | Sbjct 253506 ATAAGACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTGGCCTTTACGTTG 253565 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 |||||||| ||||| | ||||| || || || || ||||| || ||||||||||| || Sbjct 253566 TCGATAGTATCCGACGACTCGACCTCAAGTGTAATGGTCTTTCCGGTCAAAGTCTTCACA 253625 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 253626 AAGATCTGCAT 253636 Score = 138 bits (152), Expect = 2e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || ||||||||||| || | || ||||| |||||||| | || || || |||||| Sbjct 252943 TCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCTCCAACTGCTTTCCAGCAAAG 253002 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||||||| ||||| ||| || || || |||||||| |||||||| || || ||| | Sbjct 253003 ATCAAACGCTGTTGATCAGGGGGTATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTG 253062 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || |||||||||| || || || ||||| || ||||| || || | ||||| || Sbjct 253063 TCAATGGTGTCCGAAGACTCAACCTCAAGAGTAATGGTCTTTCCGGTGAGCGTCTTGACA 253122 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 253123 AAAATTTGCAT 253133 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| || ||||| ||||| ||| |||| || || || || | ||||| || Sbjct 254095 CCCTCCTTGTCCTGAATCTTGGCTTTGACGTTATCAATGGTATCGGAGGACTCGACCTCA 254154 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 254155 AGGGTGATGGTCTTTCCAGTAAGGGTCTTGACGAAAATCTGCAT 254198 >seq2402 Length=202812 Score = 95.1 bits (104), Expect = 3e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||| ||||| |||||||| || || || | ||||| ||||| || | ||| || || Sbjct 187282 CCCTCTTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGACGATTCCACCTCA 187223 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || ||||||||||||||||| | ||||| ||||| |||||||| || Sbjct 187222 AGGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAAATCTGCATCTT 187176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046704907188278