Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2206 141 7e-29 seq1986 140 2e-28 >seq2206 Length=69542 Score = 141 bits (156), Expect = 7e-29 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 ||||| || || |||||| || ||||| || |||| || ||| | || || ||| Sbjct 41075 AGGTGGAGAGTAGACTCCTTCTGAATGTTATAGTCGGAAAGAGTACGCCCATCTTCGAGC 41134 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||||||||| || || | |||||| || || | ||| | |||||||| ||| ||| Sbjct 41135 TGCTTCCCGGCGAAAATGAGACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCCTGAATC 41194 Query 44252 TTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC 44311 || ||||| | | |||||||||| || || ||||||| ||||||||||| ||| Sbjct 41195 TTTGCCTTCACGTTGTCAATGGTGTCGGACGACTCGACCTCCAGGGTAATCGTCTTACCC 41254 Query 44312 GTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||||| |||||||||||||| Sbjct 41255 GTGAGGGTCTTGACGAAGATTTGCAT 41280 Score = 140 bits (154), Expect = 2e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| |||||||| || ||| ||||| |||||||| || | || || |||| || Sbjct 41299 CACGAGGTGAAGTGTAGACTCTTTTTGAATGTTGTAGTCAGAAAGAGTACGACCGTCCTC 41358 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || ||||| || || ||||||| ||| ||||| || | ||| | |||||||| ||| Sbjct 41359 GAGTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTG 41418 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| | | |||||||||| || |||||||||| || |||||||| Sbjct 41419 AATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCCACCTCCAAAGTGATCGTCTT 41478 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||||||||| |||||||| ||||| Sbjct 41479 ACCCGTGAGGGTCTTGACGAAGATCTGCAT 41508 >seq1986 Length=559288 Score = 140 bits (154), Expect = 2e-28 Identities = 159/212 (75%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 44128 CACCA-GGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 ||||| ||||||| || |||||| |||||||||||||| | ||| ||| | || | Sbjct 252923 CACCAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCATCCT 252982 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 ||| |||||| || ||||||||||||||||| ||||| | || | |||||||| ||| Sbjct 252983 CCAACTGCTTTCCAGCAAAGATCAAACGCTGTTGATCAGGGGGTATGCCTTCCTTGTCCT 253042 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | | | |||||||| | || || ||||| | ||||| |||| Sbjct 253043 GGATCTTGGCCTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCAAGAGTAATGGTCT 253102 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||| ||||| ||||| || || ||||||||| Sbjct 253103 TTCCGGTGAGCGTCTTGACAAAAATTTGCATG 253134 Score = 111 bits (122), Expect = 1e-19 Identities = 153/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || ||| || |||||||| ||||||| ||| || | || || Sbjct 253153 ACAAGGTGAAGGGTCGACTCTTTCTGGATGTTATAATCGGAGAGGGTACGGCCATCTTCG 253212 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||| || || ||||| || | ||| ||||| || | || | |||||||| ||| Sbjct 253213 AGCTGTTTTCCAGCAAAAATAAGACGTTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGA 253272 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | |||||||| | || || || || | ||| ||||| | Sbjct 253273 ATCTTGGCCTTTACATTGT--CGATGGTGTCCGAAGACTCGACTTCGAGCGTTATCGTTT 253330 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||| || | ||||||||||||||||||||| Sbjct 253331 TTCCGGTTAAAGTCTTCACGAAGATTTGCATG 253362 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| ||| ||||| || |||||||| || | || || | || || Sbjct 253656 ACAAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCCGATAGGGTACGACCATCCTCA 253715 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || ||||| ||||| || || || || | || | |||||||| ||| Sbjct 253716 AGCTGCTTTCCAGCAAAAATCAATCGTTGTTGGTCGGGCGGGATGCCTTCCTTGTCCTGG 253775 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||| | || || ||||| | || || ||||| Sbjct 253776 ATCTTGGCCTTGACGTTATCGATGGTGTCAGGCGACTCGACCTCGAGAGTGATGGTCTTG 253835 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || ||||||||||| ||||| ||||||||| Sbjct 253836 CCAGTGAGGGTCTTGACGAAAATTTGCATG 253865 Score = 102 bits (112), Expect = 6e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 |||||||| || |||||| |||||||||||||||| ||| || | || || ||| Sbjct 253431 AGGTGAAGAGTTGACTCCTTCTGGATGTTGTAATCGGAGAGGGTACGACCATCTTCGAGC 253490 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||| || || || || | ||| ||||| || | || | ||| ||||| ||| ||| Sbjct 253491 TGCTTTCCAGCGAAAATAAGACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATC 253550 Query 44252 TTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC 44311 || ||| | | | || || || | || || ||||| | ||||| |||||||| Sbjct 253551 TTGGCCTTTACGTTGTCGATAGTATCCGACGACTCGACCTCAAGTGTAATGGTCTTTCCG 253610 Query 44312 GTGAGGGTCTTCACGAAGATTTGCAT 44337 || | |||||||| ||||| ||||| Sbjct 253611 GTCAAAGTCTTCACAAAGATCTGCAT 253636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359979181461669