Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Moniliophthora_20roreri_20[genbank_20GCA_5F001466705.1_202015-12-15] 2,557 sequences; 57,384,356 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq2206 156 4e-33 seq1986 111 1e-19 seq2370 96.9 3e-15 >seq2206 Length=69542 Score = 156 bits (172), Expect = 4e-33 Identities = 152/193 (79%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 |||||||||||||||||||||||| || || ||| | || ||||||||||| |||||||| Sbjct 41089 CTCCTTCTGAATGTTATAGTCGGAAAGAGTACGCCCATCTTCGAGCTGCTTCCCGGCGAA 41148 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 || || ||||||||||| | |||| | ||||||||| ||| | ||||| | ||| Sbjct 41149 AATGAGACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCC-TGAATCTTTGCCTTCACGT 41207 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | |||||| |||||| ||||||| || ||||| |||||||| || ||||| | Sbjct 41208 TGTCAATGGTGTCGGACGACTCGACCTCCAGGGTAATCGTCTTACCCGTGAGGGTCTTGA 41267 Query 41850 CGAAAATCTGCAT 41862 |||| || ||||| Sbjct 41268 CGAAGATTTGCAT 41280 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| || || || || ||| || |||||||| ||||| || Sbjct 41282 CCACCACGGAGACGAAGCACGAGGTGAAGTGTAGACTCTTTTTGAATGTTGTAGTCAGAA 41341 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| ||||| |||||||| ||||| ||||| || || ||||| | ||| Sbjct 41342 AGAGTACGACCGTCCTCGAGTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCAGGAGGA 41401 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||||| ||| | || || | || | | | |||||| |||||||| Sbjct 41402 ATGCCTTCCTTGTCC-TGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCCAC 41460 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || ||||| |||||||| || ||||| ||||| |||||||| Sbjct 41461 CTCCAAAGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 41508 Score = 93.3 bits (102), Expect = 4e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| || || ||||| || || ||| ||||||||||| || || || Sbjct 41794 CCACCACGGAGACGCAAGACAAGATGGAGGGTCGACTCTTTCTGAATGTTGTAATCAGAA 41853 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| |||| ||||||||||| |||||||| || || || ||||| || | ||| Sbjct 41854 AGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGTCGTTGTTGATCAGGGGG 41912 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | || || || || || ||||||||||||||| |||||||| Sbjct 41510 CCGCCACGGAGACGAAGGACGAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAC 41569 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || || ||||| || ||||| |||| |||||||||||| | ||| Sbjct 41570 AGAGTACGGCCATCTTCCAGTTGCTTCCCCGCGAAGATCAAGCGCTGTTGGTCAGGAGGA 41629 Query 41756 A 41756 | Sbjct 41630 A 41630 >seq1986 Length=559288 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || || || || || ||| ||||| |||||||| ||||| Sbjct 253134 GCCTCCACGAAGACGGAGGACAAGGTGAAGGGTCGACTCTTTCTGGATGTTATAATCGGA 253193 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||| || | || |||||||| || || || || || || || || ||||| | ||| Sbjct 253194 GAGGGTACGGCCATCTTCGAGCTGTTTTCCAGCAAAAATAAGACGTTGCTGGTCAGGGGG 253253 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || ||||||||| ||| | || || | || | | | ||||| ||||| | Sbjct 253254 GATGCCTTCCTTGTCC-TGAATCTTGGCCTTTACATTGTCGATGGTGTCCGAAGACTCGA 253312 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || | |||||||||||| || || | ||||| ||||| || |||||| Sbjct 253313 CTTCGAGCGTTATCGTTTTTCCGGTTAAAGTCTTCACGAAGATTTGCATG 253362 Score = 109 bits (120), Expect = 5e-19 Identities = 165/233 (71%), Gaps = 10/233 (4%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | || || || || ||| |||||||||||||| ||||| || Sbjct 253638 CCGCCACGGAGACGGAGGACAAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCCGAT 253697 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || |||||||| || || || |||| || |||||||| | || Sbjct 253698 AGGGTACGACCATCCTCAAGCTGCTTTCCAGCAAAAATCAATCGTTGTTGGTCGGGCGGG 253757 Query 41756 ACGCTCTCCTTGTCCATGATTTT----TTG-CTTCAACGACGACACAGTGTCGCTCGACT 41810 | || ||||||||| ||| || ||| | | | ||| | ||||| ||||| Sbjct 253758 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTATCGATG-----GTGTCAGGCGACT 253812 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | ||||| | || || || || || || || ||||| |||||||| |||||| Sbjct 253813 CGACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATTTGCATG 253865 Score = 102 bits (112), Expect = 8e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| ||||| || ||||||||||| || | || ||||||||||| || ||||| Sbjct 253445 CTCCTTCTGGATGTTGTAATCGGAGAGGGTACGACCATCTTCGAGCTGCTTTCCAGCGAA 253504 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 || || || || ||||| | || | | |||||||||| || | || || | ||| Sbjct 253505 AATAAGACGTTGCTGGTCAGGTGGGATACCCTCCTTGTCC-TGGATCTTGGCCTTTACGT 253563 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | ||| || |||||| ||||| | || || || || || |||| ||||| | Sbjct 253564 TGTCGATAGTATCCGACGACTCGACCTCAAGTGTAATGGTCTTTCCGGTCAAAGTCTTCA 253623 Query 41850 CGAAAATCTGCAT 41862 | || |||||||| Sbjct 253624 CAAAGATCTGCAT 253636 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 |||||||||||||||||||||||||||||| || | || || |||||||| || || || Sbjct 253954 CTCCTTCTGAATGTTATAGTCGGAGAGGGTACGACCATCCTCAAGCTGCTTTCCAGCAAA 254013 Query 41731 TATCAGGCGCTGTTGGTC 41748 || || ||||||||||| Sbjct 254014 GATGAGACGCTGTTGGTC 254031 >seq2370 Length=49093 Score = 96.9 bits (106), Expect = 3e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| ||||| ||||| ||||||| || || || ||||||||||||||| ||||| Sbjct 22841 CGCCACCGCGGAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAC 22900 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 ||| ||||| | || |||||||| || || || || ||||| ||||| ||||| | || Sbjct 22901 TGAGAGTGCGGCCATCTTCGAGCTGTTTTCCAGCAAAGATCAGACGCTGCTGGTCAGGGG 22960 Query 41754 GAA 41756 ||| Sbjct 22961 GAA 22963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462289223608400