Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20blollopis_20[genbank_20GCA_5F000950635.1_202014-12-09] 167 sequences; 30,479,820 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq109 111 2e-19 >seq109 Length=150709 Score = 111 bits (122), Expect = 2e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 24142 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 24201 ||||| ||| || |||||||| || || || |||||||| ||||| |||||||||| Sbjct 9065 AATCGGTGTGAAGTCCCTCGTCCCTCGAGATCAACTCGTTGGAGAACGTAAGTCCGGGCA 9006 Query 24202 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 24261 |||| || ||||| || ||||| || ||||| || || |||||||| ||||| ||||| | Sbjct 9005 TTAGTCCTCGCTTCTTGAGCCAGAAGATGGAAGCGAACGATCCAGAGAAGAAGATTCCCT 8946 Query 24262 CTACTGCCGCAAAGGCAATAAGTC 24285 | || || | ||||| | |||| Sbjct 8945 CGACGGCGGAGAAGGCGACGAGTC 8922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720360606160