Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20blollopis_20[genbank_20GCA_5F000950635.1_202014-12-09] 167 sequences; 30,479,820 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq109 118 1e-21 >seq109 Length=150709 Score = 118 bits (130), Expect = 1e-21 Identities = 115/148 (78%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 33589 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCA 33648 ||||| ||| || |||||||| || || || ||||| || ||||| |||||||||| Sbjct 9065 AATCGGTGTGAAGTCCCTCGTCCCTCGAGATCAACTCGTTGGAGAACGTAAGTCCGGGCA 9006 Query 33649 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTT 33708 |||| || ||||| || ||||| || ||||||||||| ||||| || ||||||||||| | Sbjct 9005 TTAGTCCTCGCTTCTTGAGCCAGAAGATGGAAGCGAACGATCCAGAGAAGAAGATTCCCT 8946 Query 33709 CTACTGCAGCAAAGGCAATAAGTCTCTC 33736 | || || | ||||| | |||| ||| Sbjct 8945 CGACGGCGGAGAAGGCGACGAGTCGCTC 8918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816285255760