Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20blollopis_20[genbank_20GCA_5F000950635.1_202014-12-09] 167 sequences; 30,479,820 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq109 116 5e-21 >seq109 Length=150709 Score = 116 bits (128), Expect = 5e-21 Identities = 148/201 (74%), Gaps = 7/201 (3%) Strand=Plus/Minus Query 36165 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 36224 ||||| ||| || |||||||| || || || |||||||| ||||| |||||||||| Sbjct 9065 AATCGGTGTGAAGTCCCTCGTCCCTCGAGATCAACTCGTTGGAGAACGTAAGTCCGGGCA 9006 Query 36225 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 36284 |||| || ||||| || ||||| || ||||| || || |||||||| ||||| ||||| | Sbjct 9005 TTAGTCCTCGCTTCTTGAGCCAGAAGATGGAAGCGAACGATCCAGAGAAGAAGATTCCCT 8946 Query 36285 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATG-----TATCCA 36339 | || || | ||||| | |||| ||| | || | ||| | || ||||| Sbjct 8945 CGACGGCGGAGAAGGCGACGAGTCGCTCAGC-GAAGGTGGACT-CCTTGGACGAGATCCA 8888 Query 36340 CTTTTGAGCCCAATCGGCCTT 36360 ||| |||||||||||||||| Sbjct 8887 CTTGAGAGCCCAATCGGCCTT 8867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171426064280