Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20blollopis_20[genbank_20GCA_5F000950635.1_202014-12-09] 167 sequences; 30,479,820 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq109 113 6e-20 >seq109 Length=150709 Score = 113 bits (124), Expect = 6e-20 Identities = 147/201 (73%), Gaps = 7/201 (3%) Strand=Plus/Minus Query 42072 AATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 42131 ||||| ||| || ||||| || || || || |||||||| ||||| |||||||||| Sbjct 9065 AATCGGTGTGAAGTCCCTCGTCCCTCGAGATCAACTCGTTGGAGAACGTAAGTCCGGGCA 9006 Query 42132 TTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTT 42191 |||| || ||||| || ||||| || || || || || |||||||| ||||||||||| | Sbjct 9005 TTAGTCCTCGCTTCTTGAGCCAGAAGATGGAAGCGAACGATCCAGAGAAGAAGATTCCCT 8946 Query 42192 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATG-----TATCCA 42246 | || || | ||||| | |||| ||| | || | ||| | || ||||| Sbjct 8945 CGACGGCGGAGAAGGCGACGAGTCGCTCAGC-GAAGGTGGACT-CCTTGGACGAGATCCA 8888 Query 42247 CTTTTGAGCCCAATCGGCCTT 42267 ||| |||||||||||||||| Sbjct 8887 CTTGAGAGCCCAATCGGCCTT 8867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671137798996920