Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20blollopis_20[genbank_20GCA_5F000950635.1_202014-12-09] 167 sequences; 30,479,820 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq42 96.9 3e-15 seq94 93.3 4e-14 >seq42 Length=1914076 Score = 96.9 bits (106), Expect = 3e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 22306 ATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAG 22365 || ||||||||||||||||| || || ||||| || || || || || ||||| || ||| Sbjct 595828 ATCCAAGACAAGGAGGGTATCCCCCCTGATCAGCAGCGACTCATCTTCGCCGGAAAGCAG 595769 Query 22366 TTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTA 22425 | ||||| || ||| | || ||||||||||| || || || |||||| | || || Sbjct 595768 CTCGAGGACGGACGAACCCTTTCGGATTACAACATCCAGAAGGAGTCCACCCTCCACTTG 595709 Query 22426 GTTTTGCGATTGCGCGGAGGT 22446 ||| | ||| | || |||||| Sbjct 595708 GTTCTCCGACTCCGAGGAGGT 595688 >seq94 Length=713063 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 22225 ATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACC 22284 || || ||||| || | || || || || |||| | || ||||| | | || ||| Sbjct 173153 ATCTTCGTTAAGACCCTTACGGGGAAGACCATCACCTTGGAGGTGGAGTCTTCGGACACC 173094 Query 22285 GTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGT 22344 | ||| | |||| || || || |||||||||||||| || || ||||| || || Sbjct 173093 ATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGATCAGCAGCGA 173034 Query 22345 CTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAA 22404 || || || || || || ||| | |||||| || ||| | || ||||||||||| || Sbjct 173033 CTCATCTTCGCTGGAAAGCAGCTCGAGGATGGACGAACCCTTTCGGATTACAACATCCAG 172974 Query 22405 AAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || |||||| | || || ||| | || | || ||||| Sbjct 172973 AAGGAGTCCACCCTTCACTTGGTTCTTCGTCTTCGAGGAGG 172933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727145722355