Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20blollopis_20[genbank_20GCA_5F000950635.1_202014-12-09] 167 sequences; 30,479,820 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq110 104 3e-17 >seq110 Length=2325364 Score = 104 bits (114), Expect = 3e-17 Identities = 297/452 (66%), Gaps = 11/452 (2%) Strand=Plus/Plus Query 12702 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 12761 ||||| || || ||||| || | ||| || ||| || | || |||||||| | Sbjct 1412775 CGATCGAATCGTCCTGGTCGCATGAGAGCTGGGTCGAGAACGTCCGCTCGGTTCGTTCCA 1412834 Query 12762 GCGATGACAACGATGCCCGTCTCGTT--ATC-GAAGCCATCCATCTCAGTCAAGAGTTGA 12818 |||| ||| |||||| | ||||| ||| ||| || |||||||| | ||||||| Sbjct 1412835 GCGAGGACGACGATG---GATTCGTTGGATCCGAACCCGTCCATCTCGACGAGGAGTTGA 1412891 Query 12819 TTGATGGTTTGTTCACGTTCATCATTCGCGG----GCATACCACCCGCACTGCGTTGCTT 12874 |||| || || || || || ||| | | || |||||| | || ||| Sbjct 1412892 TTGAGCGTCGACTCCCGCTCGTCGTTCCCACCGAAGGAT-CCACCCTTCCCACGAGCCTT 1412950 Query 12875 ACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAACTTC 12934 |||| |||||| || ||||| ||||| | ||| || || || | ||| | Sbjct 1412951 TCCGATGGCGTCGATCTCGTCGATGAAGATGATGCAGGGAGCGTTCTTCTTGGCCGTAGC 1413010 Query 12935 AAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGC 12994 |||| |||||| ||||| || ||||| || || ||||||||||| || | | | Sbjct 1413011 GAAGAGATCTCGAACTCTGGAGGATCCGACTCCGACGAACATCTCCACGAACTCCGAACC 1413070 Query 12995 GGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTT 13054 ||| || |||||| ||| | |||||| ||| ||||| ||||| ||||||||| Sbjct 1413071 GGAGACGGAGAAGAAGGGCACGCCAGCTTCACCGGCGGTGGCTTTGGCGATGAGGGTCTT 1413130 Query 13055 CCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACCACTTCCAAA 13114 || || || || || | ||| | ||| || || |||||| |||| || | | Sbjct 1413131 TCCGGTTCCGGGAGGTCCAGAGAGGATGGCTCCTCGAGGGATCTTGGCTCCGAGGGCGAG 1413190 Query 13115 GTAGCGCTCGGGTTGTTTAAGAAAGTCCACGA 13146 | |||| |||||||||| || || | |||| Sbjct 1413191 GAAGCGAGCGGGTTGTTTGAGGAACTTGACGA 1413222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613505919303720