Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mrakia_20blollopis_20[genbank_20GCA_5F000950635.1_202014-12-09]
167 sequences; 30,479,820 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq94 105 8e-18
seq17 102 9e-17
>seq94
Length=713063
Score = 105 bits (116), Expect = 8e-18
Identities = 137/187 (73%), Gaps = 2/187 (1%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||| || || || || || | || ||||||||||| || |||||
Sbjct 172968 CTCCTTCTGGATGTTGTAATCCGAAAGGGTTCGTCCATCCTCGAGCTGCTTTCCAGCGAA 173027
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | |||||||| || | || | | |||||||||| |||||| ||||| |||
Sbjct 173028 GATGAGTCGCTGCTGATCAGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 173086
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | ||||| || ||||| |||| |||||||| || ||||| || || ||||
Sbjct 173087 TGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCTTCCCCGTAAGGGTCTTAA 173146
Query 46581 CAAAGAT 46587
| |||||
Sbjct 173147 CGAAGAT 173153
>seq17
Length=1662258
Score = 102 bits (112), Expect = 9e-17
Identities = 126/170 (74%), Gaps = 2/170 (1%)
Strand=Plus/Plus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||| || || ||||| || | || ||||||||||| || ||||| |
Sbjct 950576 CCTTCTGGATGTTGTAATCCGAGAGAGTTCGACCATCCTCGAGCTGCTTTCCAGCGAAGA 950635
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
|||| ||||||||||| | || | | |||||| ||| |||||| ||||| ||| |
Sbjct 950636 TCAATCGCTGCTGGTCAGGAGGGATTCCCTCCTTATCCTGGATCTTGGCCTTGA-CGTTG 950694
Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAG 46572
| | |||||| |||||| || || | |||||||| || || || ||
Sbjct 950695 TCGATGGTGTCGGACGATTCAACCTCGAGAGTGATGGTCTTTCCGGTAAG 950744
Score = 87.8 bits (96), Expect = 2e-12
Identities = 89/115 (77%), Gaps = 1/115 (1%)
Strand=Plus/Plus
Query 46404 CCTTT-TGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| |||||||| || ||||| || | || ||||||||||| || |||||
Sbjct 950146 CCTTTCTGGATGTTGTAGTCCGAGAGAGTTCGACCATCCTCGAGCTGCTTTCCAGCGAAG 950205
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA 46517
||||| ||||||||||| | || | | |||||| ||| |||||| |||||
Sbjct 950206 ATCAATCGCTGCTGGTCAGGAGGGATTCCCTCCTTATCCTGGATCTTAGCCTTGA 950260
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565237220064840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |