Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20blollopis_20[genbank_20GCA_5F000950635.1_202014-12-09] 167 sequences; 30,479,820 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq94 111 1e-19 seq42 89.7 3e-13 >seq94 Length=713063 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 8/210 (4%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| ||| || ||||| ||||| || ||||||||| ||||| |||| || Sbjct 172950 AACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTTCGTCCATCCTC 173009 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| ||||| || || || ||||| ||||| || | || | ||||||||||| Sbjct 173010 GAGCTGCTTTCCAGCGAAGATGAGTCGCTGCTGATCAGGAGGGATACCCTCCTTGTCCTG 173069 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGG 34947 ||||| ||||| | | ||||| | ||| | ||| || || | ||| |||| Sbjct 173070 GATCTTGGCCTTGAC----GTTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGG 173125 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCT 34977 | || ||||| || ||||| || ||||||| Sbjct 173126 TCTTCCCCGTAAGGGTCTTAACGAAGATCT 173155 >seq42 Length=1914076 Score = 89.7 bits (98), Expect = 3e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||| | ||| || ||||| ||||| || ||||||||| ||||| | || || Sbjct 595706 AACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTTCGTCCGTCCTC 595765 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 ||||| |||||||| || || ||||| ||||| || | || | ||||||||||| Sbjct 595766 GAGCTGCTTTCCGGCGAAGATGAGTCGCTGCTGATCAGGGGGGATACCCTCCTTGTC 595822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632939269176