Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20blollopis_20[genbank_20GCA_5F000950635.1_202014-12-09] 167 sequences; 30,479,820 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq6 113 4e-20 >seq6 Length=1934737 Score = 113 bits (124), Expect = 4e-20 Identities = 168/236 (71%), Gaps = 12/236 (5%) Strand=Plus/Plus Query 30046 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATG----AGGTC 30101 |||||||| || | || ||||| | |||||| || |||||| |||| || | Sbjct 1479827 GGGTTCCAAGCACTCAAAATGATCCTCCTGTCGGTAGGATTGTTCTTGATCTTCCAGATA 1479886 Query 30102 CACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTA 30161 || || | ||||||||| |||||| ||| | |||||| || |||| ||| Sbjct 1479887 CA----GTCCTCCAGCTGATCTACCCCCTTCCTCTTGTAGTCGGCGTGACAGTCCTCGTA 1479942 Query 30162 CTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30221 || ||||||||||||||||||||||||||||| || ||||| || |||||||| || | Sbjct 1479943 CTTCGCTCCGAAATGCCTCCACTGGAACCCGTAGACAGGTCCGAGATCTCCCTCCTCTCG 1480002 Query 30222 GTGCTCGAAGCCCCTC--TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGAT 30275 ||| ||| |||| ||| | ||| ||| |||||||| |||||||||| Sbjct 1480003 GTG--AGAAAGACCTCGAGAGTCGAGGAAGGCTCGAGAACCGTTCCCGTCCCAGAT 1480056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408616768335491