Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20blollopis_20[genbank_20GCA_5F000950635.1_202014-12-09] 167 sequences; 30,479,820 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq6 123 5e-23 seq109 87.8 3e-12 >seq6 Length=1934737 Score = 123 bits (136), Expect = 5e-23 Identities = 273/401 (68%), Gaps = 15/401 (4%) Strand=Plus/Minus Query 212958 GAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGC 213017 || ||||| ||||||| || ||||||| ||||| ||||| || || || ||| Sbjct 649495 GAGGTGTAAGGCTCGAAGCACTCGTTGAAACCCAGGATCTGACTCGTTGAAGCAGTAGGC 649436 Query 213018 ATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGA-GGCGCCGAAGCTC 213076 || ||||| || ||||| |||||| | |||||| || |||| ||| || | Sbjct 649435 ATAGGAGCGACAAGGAGCGAGTTCCTGATTCCGTGGACGGCGATCTTGGCTTTGAGGGAA 649376 Query 213077 TGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAA 213136 ||||||||||| | | | ||| | || ||||||||| |||| | Sbjct 649375 -GCCCAGTCCCAAAGGTCGGT-AGGAG--------TAACACCCCACATGTCGTACTGGA- 649327 Query 213137 GATGCCTTTGCTC-ACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCA 213195 | || | ||| |||||| |||||||| | ||||||| || | || || || | Sbjct 649326 GCTGACCCTGCGAGACGGGGGATCCCTGGTAGGTCGAGTAGGCTCCCTCCTTCTCAGCGA 649267 Query 213196 GCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCT 213255 |||||| || |||| || || |||| ||||||||| || || |||| ||||||||| Sbjct 649266 TCTCGCACGAAGCCTCGAGAGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCT 649207 Query 213256 TCTTGGCCTCTGGGGACGT-GAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCC 213314 |||||||||| ||| ||| ||||||||| | | ||| |||| || || ||| Sbjct 649206 TCTTGGCCTC-GGGTCCGTCGAAGGGCATTCGAAGGATCATGAAGGCATCGGCGAGTCCC 649148 Query 213315 TGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTT 213355 || || |||| |||||||||| ||||| || ||| || || Sbjct 649147 TGCACTCCGACTCCGATGGGTCGGTGTCGCATGTTGGAGTT 649107 >seq109 Length=150709 Score = 87.8 bits (96), Expect = 3e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 48144 TGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCC 48203 |||| | || ||||||| ||| | | |||||||||| || || ||||| | | Sbjct 9059 TGTGAAGTCCCTCGTCCCTCGAGATCAACTCGTTGGAGAACGTAAGTCCGGGCATTAGTC 9000 Query 48204 CCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTG 48263 | | || ||||||||||| || | ||||| || |||||||||||||| ||||| || | Sbjct 8999 CTCGCTTCTTGAGCCAGAAGATGGAAGCGAACGATCCAGAGAAGAAGATTCCCTCGACGG 8940 Query 48264 CCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCG 48323 | | ||| ||| ||| | ||| |||| | | | |||| |||||||| || | Sbjct 8939 CGGAGAAGGCGACGAGTCGCTCAGCGAAGGTGGACTCCTTGGACGAGATCCACTTGAGAG 8880 Query 48324 CCCAGTCTGCCTT 48336 |||| || ||||| Sbjct 8879 CCCAATCGGCCTT 8867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931530855425280