Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20blollopis_20[genbank_20GCA_5F000950635.1_202014-12-09] 167 sequences; 30,479,820 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq6 113 8e-20 seq109 95.1 2e-14 >seq6 Length=1934737 Score = 113 bits (124), Expect = 8e-20 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAA 221479 || || ||||||||||||||||| |||||| ||||||| ||||||||||||| Sbjct 649249 AGAGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGGTCCG 649190 Query 221480 GTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATG 221539 ||||||||| || || ||| ||| | ||||| |||||||| ||||||| |||||| Sbjct 649189 TCGAAGGGCATTCGAAGGATCATGAAGGCATCGGCGAGTCCCTGCACTCCGACTCCGATG 649130 Query 221540 GGCCTGTGTCTCCTGTTGGA 221559 || | ||||| | ||||||| Sbjct 649129 GGTCGGTGTCGCATGTTGGA 649110 >seq109 Length=150709 Score = 95.1 bits (104), Expect = 2e-14 Identities = 116/153 (76%), Gaps = 4/153 (3%) Strand=Plus/Plus Query 25876 GAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCC 25935 ||||| || || ||||| | || || ||||| ||||| ||| || ||||| || || Sbjct 8918 GAGCGACTCGTCGCCTTCTCCGCCGTCGAGGGAATCTTCTTCTCTGGATCGTTCGCTTCC 8977 Query 25936 ATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTAC-TTTTCCAACGAGCTCA 25993 ||||||||||||||| || | |||| |||||||| || ||| || ||||||||| | | Sbjct 8978 ATCTTCTGGCTCAAGAAG-CGAGGACTAATGCCCGGACT-TACGTTCTCCAACGAGTTGA 9035 Query 25994 TCAGCAGGGACGAGGGTCTCCACAGAGATTTTG 26026 || ||||||||||| || |||| |||| || Sbjct 9036 TCTCGAGGGACGAGGGACTTCACACCGATTGTG 9068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928842861036480