Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mrakia_20blollopis_20[genbank_20GCA_5F000950635.1_202014-12-09]
167 sequences; 30,479,820 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq38 109 9e-18
seq109 105 1e-16
seq6 89.7 8e-12
>seq38
Length=2072532
Score = 109 bits (120), Expect = 9e-18
Identities = 153/212 (72%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 1485485 CCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGG 1485544
||||||| ||||| |||| |||||| ||| || || ||| | | ||| || || ||||
Sbjct 1609404 CCTTGGTTCCCTCGGAGATAGCGTGCTTGGAAAGCTCTCCGGGAAGGATGAGTCGGACGG 1609345
Query 1485545 CGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG-CGCCAGGCGGCCG 1485603
||||||||||||| | || ||| ||| |||||| || | || || |
Sbjct 1609344 CGGTCTGGATCTCCCTGGACGAGATGGTGGACTTCTTGTT-GTAAGAAGCGAGCTTGGAA 1609286
Query 1485604 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGAT 1485663
||||||| | |||| || |||| || |||||||| || ||||| | ||| ||||| |
Sbjct 1609285 GCCTCGGAGGCGATTCGCTCGAAGATATCGTTGACGAAGGAGTTGAGGATGGACATGGCC 1609226
Query 1485664 TTGTTGGAGATGCCCACGTCGGGGTGCACCTG 1485695
||||||||||| || ||||||||| |||||
Sbjct 1609225 TTGTTGGAGATACCAGTGTCGGGGTGGACCTG 1609194
>seq109
Length=150709
Score = 105 bits (116), Expect = 1e-16
Identities = 117/156 (75%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 793916 CACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAA 793975
||| ||| |||||| ||||||| || |||| |||||||||| |||||| | |||
Sbjct 9541 CACTCGCTTCTCGAAGAAGTTGGCTTTCCCCTGAAGCGAGATCATCTCCATGAAGTCGAA 9482
Query 793976 CGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGAC 794035
||||||| | ||||||||||| |||||||| | || || || ||||||||
Sbjct 9481 GGGGTTGGAAGATCCCCAGTGCTTCTCGTTTCCGAGCGAGACGAGGAGTCGATCGGCGAC 9422
Query 794036 GAATTCAATGTACTGGCACATGAGGGCGGCGTTCAT 794071
||| || ||||||||||||||||| || ||||||
Sbjct 9421 GAACTCGATGTACTGGCACATGAGAGCACAGTTCAT 9386
Score = 100 bits (110), Expect = 5e-15
Identities = 129/177 (73%), Gaps = 7/177 (4%)
Strand=Plus/Minus
Query 794355 GATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGAT 794414
|||||| |||||| || || |||||||| || || |||||||||||||| |||||
Sbjct 9037 GATCAACTCGTTGGAGAACGTAAGTCCGGGCATTAGTCCTCGCTTCTTGAGCCAGAAGAT 8978
Query 794415 GGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTC 794474
|| | ||| || ||||| ||||| ||||||||||||| ||| ||||||| |||||
Sbjct 8977 GGAAGCGAACGATCCAGAGAAGAAGATTCCCTCGACGGCGGAGAAGGCGACGAGTCGCTC 8918
Query 794475 GGCAAAAGTGTCCAGGCCCTCTTTG--TTGATCCACTTCATCGCCCACTCTGCCTTT 794529
|| || || || | ||| | ||||||||| | ||||| || ||||||
Sbjct 8917 AGCGAAGGT-----GGACTCCTTGGACGAGATCCACTTGAGAGCCCAATCGGCCTTT 8866
>seq6
Length=1934737
Score = 89.7 bits (98), Expect = 8e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936
|||| ||| |||| || ||||| || || || ||||||||| ||||||||||| | |
Sbjct 648344 TCCAAAGGGCGTAGAAAAGATCTCGAGCTCGAGACTCCTCCTTTCCGTGGTTCTTCCTGA 648285
Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAG 2071980
|||| || |||||| || ||| |||||||| ||||| ||||||
Sbjct 648284 GGTCCAGGAAGTCGAAGATGTCCGCGTGCCAAGGCTCGAGGTAG 648241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916228635448313
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |