Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20blollopis_20[genbank_20GCA_5F000950635.1_202014-12-09] 167 sequences; 30,479,820 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq94 123 2e-23 seq17 96.9 2e-15 seq42 93.3 3e-14 >seq94 Length=713063 Score = 123 bits (136), Expect = 2e-23 Identities = 152/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| |||| ||||||||| ||||| || ||||| ||| | || |||| Sbjct 172948 AGAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTTCGTCCATCC 173007 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||| |||||||| ||||| ||||| || | || | ||||||||||| Sbjct 173008 TCGAGCTGCTTTCCAGCGAAGATGAGTCGCTGCTGATCAGGAGGGATACCCTCCTTGTCC 173067 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | ||| || || | ||| |||||| Sbjct 173068 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTC 173127 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCT 34973 || ||||| |||||||| || ||||||| Sbjct 173128 TTCCCCGTAAGGGTCTTAACGAAGATCT 173155 >seq17 Length=1662258 Score = 96.9 bits (106), Expect = 2e-15 Identities = 125/172 (73%), Gaps = 8/172 (5%) Strand=Plus/Plus Query 34790 TTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATC 34849 ||||| ||||| |||||||| || | || |||| || || |||||||| ||||||||| Sbjct 950149 TTCTGGATGTTGTAGTCCGAGAGAGTTCGACCATCCTCGAGCTGCTTTCCAGCGAAGATC 950208 Query 34850 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT 34909 | ||| |||||||| | || | |||||||| || | || || |||||| | Sbjct 950209 AATCGCTGCTGGTCAGGAGGGATTCCCTCCTTATCCTGGATCTTAGCCTTGACGT----T 950264 Query 34910 ATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGG 34957 |||||| || || |||||| || | ||| ||||||||||| |||||| Sbjct 950265 ATCGATGGTGTCGGAGGACTCGACCTCGAGGGTAATGGTCTTTCCAGTGAGG 950316 Score = 95.1 bits (104), Expect = 8e-15 Identities = 130/180 (72%), Gaps = 9/180 (5%) Strand=Plus/Plus Query 34783 GCTCTCCTT-CTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGG 34841 |||| |||| ||| ||||| || || || ||| | || | || || ||||||||||| | Sbjct 950960 GCTCACCTTTCTGGATGTTGTAATCGGAGAGGGTTCGTCCGTCCTCGAGTTGCTTTCCAG 951019 Query 34842 CGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGA 34901 ||||||| ||||||||||| || | || | || |||||||| | || || |||| Sbjct 951020 CGAAGATGAGTCGTTGCTGATCAGGAGGGATTCCTTCCTTGTCCTGGATCTTAGCCTTGA 951079 Query 34902 CGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGG 34957 | | ||||||| || || |||||| || | ||| ||||||||||| |||||| Sbjct 951080 C----GTTATCGATGGTGTCGGAGGACTCGACCTCGAGGGTAATGGTCTTTCCGGTGAGG 951135 >seq42 Length=1914076 Score = 93.3 bits (102), Expect = 3e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||| ||||||||| ||||| || ||||| ||| | || | || Sbjct 595704 AGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTTCGTCCGTCC 595763 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||||||||||||||| ||||| ||||| || | || | ||||||||||| Sbjct 595764 TCGAGCTGCTTTCCGGCGAAGATGAGTCGCTGCTGATCAGGGGGGATACCCTCCTTGTC 595822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692137113373