Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20blollopis_20[genbank_20GCA_5F000950635.1_202014-12-09] 167 sequences; 30,479,820 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq94 91.5 1e-13 seq17 87.8 2e-12 >seq94 Length=713063 Score = 91.5 bits (100), Expect = 1e-13 Identities = 135/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| | | |||||| | || || |||||||| || || || Sbjct 172968 CTCCTTCTGGATGTTGTAATCCGAAAGGGTTCGTCCATCCTCGAGCTGCTTTCCAGCGAA 173027 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | |||||||| || | ||| | | |||||||||| |||||| ||| | || Sbjct 173028 GATGAGTCGCTGCTGATCAGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 173086 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || |||||||||| ||||| || || ||||| | || || | Sbjct 173087 TGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCTTCCCCGTAAGGGTCTTAA 173146 Query 35724 CAAATATCT 35732 | || |||| Sbjct 173147 CGAAGATCT 173155 >seq17 Length=1662258 Score = 87.8 bits (96), Expect = 2e-12 Identities = 121/167 (72%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || ||||||||||| | | ||||| | || || |||||||| || || || | Sbjct 950576 CCTTCTGGATGTTGTAATCCGAGAGAGTTCGACCATCCTCGAGCTGCTTTCCAGCGAAGA 950635 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 |||| ||||||||||| | ||| | | |||||| ||| |||||| ||| | |||| Sbjct 950636 TCAATCGCTGCTGGTCAGGAGGGATTCCCTCCTTATCCTGGATCTTGGCCTTGA-CGTTG 950694 Query 35667 -CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | | |||||| |||||| ||||| | ||||| || || || || Sbjct 950695 TCGATGGTGTCGGACGATTCAACCTCGAGAGTGATGGTCTTTCCGGT 950741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792658968360