Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20blollopis_20[genbank_20GCA_5F000950635.1_202014-12-09] 167 sequences; 30,479,820 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq110 113 6e-20 seq109 84.2 3e-11 >seq110 Length=2325364 Score = 113 bits (124), Expect = 6e-20 Identities = 299/452 (66%), Gaps = 11/452 (2%) Strand=Plus/Plus Query 14063 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 14122 ||||| || || ||||| || | ||| || ||| || | || |||||||| | Sbjct 1412775 CGATCGAATCGTCCTGGTCGCATGAGAGCTGGGTCGAGAACGTCCGCTCGGTTCGTTCCA 1412834 Query 14123 GCGATGACAACGATGCCCGTCTCGTT--ATCA-AAGCCATCCATCTCAGTCAAGAGTTGA 14179 |||| ||| |||||| | ||||| ||| || || |||||||| | ||||||| Sbjct 1412835 GCGAGGACGACGATG---GATTCGTTGGATCCGAACCCGTCCATCTCGACGAGGAGTTGA 1412891 Query 14180 TTGATGGTTTGTTCGCGTTCATCATTCGCAG----GCATACCACCCGCACTGCGTTGCTT 14235 |||| || || || || || ||| || | || |||||| | || ||| Sbjct 1412892 TTGAGCGTCGACTCCCGCTCGTCGTTCCCACCGAAGGAT-CCACCCTTCCCACGAGCCTT 1412950 Query 14236 ACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTC 14295 |||| |||||| || || |||||||| | ||| || || || | ||| | Sbjct 1412951 TCCGATGGCGTCGATCTCGTCGATGAAGATGATGCAGGGAGCGTTCTTCTTGGCCGTAGC 1413010 Query 14296 AAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGC 14355 |||| |||||| ||||| || ||||| || || ||||||||||| || | | | Sbjct 1413011 GAAGAGATCTCGAACTCTGGAGGATCCGACTCCGACGAACATCTCCACGAACTCCGAACC 1413070 Query 14356 GGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTT 14415 ||| || |||||| ||| || |||||| ||| ||||| ||||| ||||||||| Sbjct 1413071 GGAGACGGAGAAGAAGGGCACGCCAGCTTCACCGGCGGTGGCTTTGGCGATGAGGGTCTT 1413130 Query 14416 CCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACCACTGCCAAA 14475 || || || || || | ||| | ||| || || |||||| |||| || | | | Sbjct 1413131 TCCGGTTCCGGGAGGTCCAGAGAGGATGGCTCCTCGAGGGATCTTGGCTCCGAGGGCGAG 1413190 Query 14476 GTAGCGTTCAGGTTGTTTAAGGAAGTCCACGA 14507 | |||| | |||||||| ||||| | |||| Sbjct 1413191 GAAGCGAGCGGGTTGTTTGAGGAACTTGACGA 1413222 >seq109 Length=150709 Score = 84.2 bits (92), Expect = 3e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| || |||||||| | ||||| | || || ||||| || || ||||| || || Sbjct 9058 GTGAAGTCCCTCGTCCCTCGAGATCAACTCGTTGGAGAACGTAAGTCCGGGCATTAGTCC 8999 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||| | |||||| || | | || || |||||||||||||| ||||| || Sbjct 8998 TCGCTTCTTGAGCCAGAAGATGGAAGCGAACGATCCAGAGAAGAAGATTCCCTCGACGGC 8939 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 | ||| || | ||| |||||||| |||| Sbjct 8938 GGAGAAGGCGACGAGTCGCTCAGCGAAGG 8910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433909016520