Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20blollopis_20[genbank_20GCA_5F000950635.1_202014-12-09] 167 sequences; 30,479,820 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq109 118 1e-21 seq42 82.4 9e-11 >seq109 Length=150709 Score = 118 bits (130), Expect = 1e-21 Identities = 157/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT-TGATACAA--AGT 94789 |||| || || |||| | || || ||||||||| | |||||| | | | ||| ||| Sbjct 8847 CAGTCCCCTGCATTCGACGAAAGGCCGATTGGGCTCTCAAGTGGATCTCGTCCAAGGAGT 8906 Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849 | |||| |||||||||||| |||| || | || ||||| ||||||||||||| Sbjct 8907 CCA---CCTTCGCTGAGCGACTCGTCGCCTTCTCCGCCGTCGAGGGAATCTTCTTCTCTG 8963 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 | || ||| | || | ||||||||||||||||| || ||||| || || |||| Sbjct 8964 GATCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGAGGACTAATGCCCGGACTTACGTTCT 9023 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||||||| | ||||| | ||||||||||| ||| Sbjct 9024 CCAACGAGTTGATCTCGAGGGACGAGGGACTTCAC 9058 >seq42 Length=1914076 Score = 82.4 bits (90), Expect = 9e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 169348 CTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGAGACCCGCGAC 169407 ||| || |||||||||||||| ||||||||||| || || |||| | ||| || ||||| Sbjct 1391922 CTTTCCTCGAAGAGGGAAGACTCCGTAGTGATCTCGTCCGACGATGTCGAGTCCGGCGAC 1391863 Query 169408 TGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACA 169452 ||||| | || || || || || ||||||| ||||| || || Sbjct 1391862 GGCGAGCGCTTTGGCGGAATCTCCTTCGGTGAGAATGAGAGTGCA 1391818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259582443080