Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20blollopis_20[genbank_20GCA_5F000950635.1_202014-12-09] 167 sequences; 30,479,820 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq94 84.2 1e-11 >seq94 Length=713063 Score = 84.2 bits (92), Expect = 1e-11 Identities = 168/246 (68%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 23615 AGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACA 23674 |||| |||||||| ||||| ||||| || || ||||| | || || || || |||||| Sbjct 173155 AGATCTTCGTTAAGACCCTTACGGGGAAGACCATCACCTTGGAGGTGGAGTCTTCGGACA 173096 Query 23675 CTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGC 23734 | | || | | || || || ||||| || ||| | || || ||||| |||| Sbjct 173095 CCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGATCAGCAGC 173036 Query 23735 GTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCAC--TTTAGGCGATTACAACAT 23792 | | || || || || || || || || || | ||| || ||| || |||||||||| Sbjct 173035 GACTCATCTTCGCTGGAAAGCAGCTCGAGGATGGACGAACCCTTTCGG--ATTACAACAT 172978 Query 23793 ACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGATC--AGCAGTTAAA 23850 || || |||||||| | || || ||| | | | ||||||||| | || || ||| Sbjct 172977 CCAGAAGGAGTCCACCCTTCACTTGGTTCTTCGTCTTCGAGGAGGAGCCAAGAAGAGAAA 172918 Query 23851 GATGAA 23856 || ||| Sbjct 172917 GAAGAA 172912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008912044836