Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F000815965.1_202015-01-07] 1,539 sequences; 28,651,359 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq309 91.5 2e-13 >seq309 Length=30380 Score = 91.5 bits (100), Expect = 2e-13 Identities = 204/303 (67%), Gaps = 14/303 (5%) Strand=Plus/Minus Query 145924 GCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGG---GGTTCCTCTTGATCTCC 145980 || |||||||| || | | | || ||||||| |||| | || ||||||||| | Sbjct 4808 GCAGGGTTCCAAGCACTCAAAATGATCCTCCTG---TCGGTAGGATTGTTCTTGATCTTC 4752 Query 145981 CCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACG 146040 | || |||| ||||| || || |||| || | ||| || | | ||||| || Sbjct 4751 CAGATACAGTCCTCCAGCTGATCTACCCCCTTCCTCTTGTAGTCGGCGTGACAGTCCTCG 4692 Query 146041 TACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCC 146100 ||| || ||||| ||||||||||||||||||||||| || || || || || ||| Sbjct 4691 TACTTCGCTCCGAAATGCCTCCACTGGAACCCGTAGACAGGTCCGAGATCTCCCTCCTCT 4632 Query 146101 CTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTG 146160 | ||| || || | |||||||| | || || ||||| |||||||||| | | Sbjct 4631 CGGTGAGAAAGACCTCGAGAGTCGAGGAAGGCTCGAGAACCGTTCCCGTCCCAGATGTGG 4572 Query 146161 ACGCCCCTC----GCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAG 146216 | | || || || | ||| || | ||| || || || |||||||||||| || Sbjct 4571 ATGTCCTTCTGCTGCAGCGAGAGCA-TCGAG---GTCGAGCCGGAGATGAACCAGAGGAG 4516 Query 146217 CTC 146219 ||| Sbjct 4515 CTC 4513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590065448397560