Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F000815965.1_202015-01-07] 1,539 sequences; 28,651,359 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq712 113 6e-20 >seq712 Length=12724 Score = 113 bits (124), Expect = 6e-20 Identities = 147/201 (73%), Gaps = 7/201 (3%) Strand=Plus/Minus Query 42072 AATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 42131 ||||| ||| || ||||| || || || || |||||||| ||||| |||||||||| Sbjct 6161 AATCGGTGTGAAGTCCCTCGTCCCTCGAGATCAACTCGTTGGAGAACGTAAGTCCGGGCA 6102 Query 42132 TTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTT 42191 |||| || ||||| || ||||| || || || || || |||||||| ||||||||||| | Sbjct 6101 TTAGTCCTCGCTTCTTGAGCCAGAAGATGGAAGCGAACGATCCAGAGAAGAAGATTCCCT 6042 Query 42192 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATG-----TATCCA 42246 | || || | ||||| | |||| ||| | || | ||| | || ||||| Sbjct 6041 CGACGGCGGAGAAGGCGACGAGTCGCTCAGC-GAAGGTGGACT-CCTTGGACGAGATCCA 5984 Query 42247 CTTTTGAGCCCAATCGGCCTT 42267 ||| |||||||||||||||| Sbjct 5983 CTTGAGAGCCCAATCGGCCTT 5963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671126288959640