Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F000815965.1_202015-01-07] 1,539 sequences; 28,651,359 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq712 111 2e-19 >seq712 Length=12724 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 6/171 (4%) Strand=Plus/Plus Query 125417 CGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGC 125476 ||| || |||| || || ||| ||||||| ||||| |||||||| || || || || Sbjct 6010 CGCTGAGCGACTCGTCGCCTTCTCCGCCGTCGAGGGAATCTTCTTCTCTGGATCGTTCGC 6069 Query 125477 GGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTT 125536 ||||||| |||||||||||||| ||||| ||||||||||| ||| | |||||||| Sbjct 6070 TTCCATCTTCTGGCTCAAGAAGCGAGGACTAATGCCCGGACTTACGTTCTCCAACGAGTT 6129 Query 125537 TATATCTCGAGACGAGGGCCTACAC------TGTGACTTTGCCATTCTACT 125581 || || | |||||||| || ||| ||||| ||||| |||| || Sbjct 6130 GATCTCGAGGGACGAGGGACTTCACACCGATTGTGAGCTTGCCCTTCTCCT 6180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741044943873640