Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F000815965.1_202015-01-07] 1,539 sequences; 28,651,359 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq309 93.3 3e-14 >seq309 Length=30380 Score = 93.3 bits (102), Expect = 3e-14 Identities = 162/235 (69%), Gaps = 8/235 (3%) Strand=Plus/Minus Query 25668 AGGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATA----AGAT 25723 ||||||||| || | || ||||| | |||||| || |||| | |||| |||| Sbjct 4806 AGGGTTCCAAGCACTCAAAATGATCCTCCTGTCGGTAGGATTGTTCTTGATCTTCCAGAT 4747 Query 25724 CCGCGGTGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGT 25783 | || | ||||||||| |||||| ||| | |||||| || |||| || Sbjct 4746 ACA----GTCCTCCAGCTGATCTACCCCCTTCCTCTTGTAGTCGGCGTGACAGTCCTCGT 4691 Query 25784 ACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCC 25843 ||| |||||||||| |||||||||||||||||| || ||||| || ||||| || || | Sbjct 4690 ACTTCGCTCCGAAATGCCTCCACTGGAACCCGTAGACAGGTCCGAGATCTCCCTCCTCTC 4631 Query 25844 TGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGAT 25898 ||| || || | || | ||| ||| ||||| || |||||||||| Sbjct 4630 GGTGAGAAAGACCTCGAGAGTCGAGGAAGGCTCGAGAACCGTTCCCGTCCCAGAT 4576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340131220187847