Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F000815965.1_202015-01-07] 1,539 sequences; 28,651,359 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq712 82.4 8e-11 >seq712 Length=12724 Score = 82.4 bits (90), Expect = 8e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCC 52385 || || ||| |||| |||||| | ||||| | ||||||||| | | | || Sbjct 5945 GTCCCCTGCATTCGACGAAAGGCCGATTGGGCTCTCAAGTGGATCTCGTCCAAGGAGTCC 6004 Query 52386 ACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGC 52445 || | || ||||| | || |||||| || |||||||| | || || || || Sbjct 6005 ACCTTCGCTGAGCGACTCGTCGCCTTCTCCGCCGTCGAGGGAATCTTCTTCTCTGGATCG 6064 Query 52446 TTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAAC 52505 || || ||||||| | | || | | ||| |||||||||| || |||||| |||| Sbjct 6065 TTCGCTTCCATCTTCTGGCTCAAGAAGCGAGGACTAATGCCCGGACTTACGTTCTCCAAC 6124 Query 52506 GAGTTGATATCGCGCGACGAAGGACTGCACACGGA 52540 |||||||| ||| | ||||| ||||| ||||| || Sbjct 6125 GAGTTGATCTCGAGGGACGAGGGACTTCACACCGA 6159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496252853152080