Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F000815965.1_202015-01-07] 1,539 sequences; 28,651,359 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq249 82.4 1e-10 >seq249 Length=34678 Score = 82.4 bits (90), Expect = 1e-10 Identities = 141/204 (69%), Gaps = 3/204 (1%) Strand=Plus/Minus Query 7873 GGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTT 7932 || ||| ||||| | | ||| | ||||| ||| || |||| |||| ||||| Sbjct 30459 GGAGATGACCTTGAAAGGCCAGTGCTTCATGTCGGACTGAACCTCGGCGTCCTCGAACTT 30400 Query 7933 TCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTT 7992 || ||| || || ||||| || || || | | ||| | ||||||||||| ||||| Sbjct 30399 TCGTCCAATGAGTCGCTTAGCGTCGAAGATGGAGTTGGTAGGGTTCATGGCGACCTGGTT 30340 Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 ||| || || || ||||| || || || | || || || |||||||| || || || Sbjct 30339 CTTGGCGGCATCTCCGATGAGTCGCTC---AGAGTCGGTGAAGGCGACGTAGGAAGGAGT 30283 Query 8053 CGTTCGATTCCCTTGGTCGTTCGC 8076 ||||| || || |||||||| || Sbjct 30282 GGTTCGGTTTCCCTGGTCGTTGGC 30259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635120581632760