Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F000815965.1_202015-01-07] 1,539 sequences; 28,651,359 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq712 118 1e-21 >seq712 Length=12724 Score = 118 bits (130), Expect = 1e-21 Identities = 157/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 102109 CAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT-TGATACAA--AGT 102165 |||| || || |||| | || || ||||||||| | |||||| | | | ||| ||| Sbjct 5943 CAGTCCCCTGCATTCGACGAAAGGCCGATTGGGCTCTCAAGTGGATCTCGTCCAAGGAGT 6002 Query 102166 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225 | |||| |||||||||||| |||| || | || ||||| ||||||||||||| Sbjct 6003 CCA---CCTTCGCTGAGCGACTCGTCGCCTTCTCCGCCGTCGAGGGAATCTTCTTCTCTG 6059 Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 | || ||| | || | ||||||||||||||||| || ||||| || || |||| Sbjct 6060 GATCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGAGGACTAATGCCCGGACTTACGTTCT 6119 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||||| | ||||| | ||||||||||| ||| Sbjct 6120 CCAACGAGTTGATCTCGAGGGACGAGGGACTTCAC 6154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620730458468080