Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F000815965.1_202015-01-07] 1,539 sequences; 28,651,359 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq274 113 8e-20 seq712 95.1 2e-14 >seq274 Length=32796 Score = 113 bits (124), Expect = 8e-20 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAA 221479 || || ||||||||||||||||| |||||| ||||||| ||||||||||||| Sbjct 29759 AGAGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGGTCCG 29818 Query 221480 GTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATG 221539 ||||||||| || || ||| ||| | ||||| |||||||| ||||||| |||||| Sbjct 29819 TCGAAGGGCATTCGAAGGATCATGAAGGCATCGGCGAGTCCCTGCACTCCGACTCCGATG 29878 Query 221540 GGCCTGTGTCTCCTGTTGGA 221559 || | ||||| | ||||||| Sbjct 29879 GGTCGGTGTCGCATGTTGGA 29898 >seq712 Length=12724 Score = 95.1 bits (104), Expect = 2e-14 Identities = 116/153 (76%), Gaps = 4/153 (3%) Strand=Plus/Plus Query 25876 GAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCC 25935 ||||| || || ||||| | || || ||||| ||||| ||| || ||||| || || Sbjct 6014 GAGCGACTCGTCGCCTTCTCCGCCGTCGAGGGAATCTTCTTCTCTGGATCGTTCGCTTCC 6073 Query 25936 ATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTAC-TTTTCCAACGAGCTCA 25993 ||||||||||||||| || | |||| |||||||| || ||| || ||||||||| | | Sbjct 6074 ATCTTCTGGCTCAAGAAG-CGAGGACTAATGCCCGGACT-TACGTTCTCCAACGAGTTGA 6131 Query 25994 TCAGCAGGGACGAGGGTCTCCACAGAGATTTTG 26026 || ||||||||||| || |||| |||| || Sbjct 6132 TCTCGAGGGACGAGGGACTTCACACCGATTGTG 6164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928826931348160