Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F000815965.1_202015-01-07] 1,539 sequences; 28,651,359 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq109 82.4 9e-11 >seq109 Length=52016 Score = 82.4 bits (90), Expect = 9e-11 Identities = 157/226 (69%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 || ||||||||||| ||||| ||| | ||| | || || || || |||||||||||| Sbjct 17903 GGAGCCAAGATCCCTCGAGGAGCCATCCTCTCTGGACCTCCCGGAACCGGAAAGACCCTC 17844 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATC-CAGTGCTCTGCCGCAAA 175394 ||||| ||||| ||| |||||| | || || ||| || | || ||| | | | Sbjct 17843 ATCGCCAAAGCCACCGCCGGTGAAGCTGGCGTGCCCTTCTTCTCCGT-CTCCGGTTCGGA 17785 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454 || ||||||||||| || || || || || || ||||| |||||||| | | || Sbjct 17784 GTTCGTGGAGATGTTCGTCGGAGTCGGATCCTCCAGAGTTCGAGATCTCTTCGCTA-CGG 17726 Query 175455 CCGCGAA-AATCAACCATGTATTGTCTTCATTGATGAGATTGATGC 175499 || ||| || || || || ||||||| || ||||| || || Sbjct 17725 CCAAGAAGAACGCTCCCTGCATCATCTTCATCGACGAGATCGACGC 17680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596558123492320