Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F000815965.1_202015-01-07] 1,539 sequences; 28,651,359 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq44 104 5e-17 >seq44 Length=75583 Score = 104 bits (114), Expect = 5e-17 Identities = 101/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680 ||||||| || || ||||| || || ||| ||||| || ||||| |||||||| |||| Sbjct 47118 CTTTCTGGATGTTGTAATCGGAGAGGGTTCGTCCGTCCTCGAGTTGCTTTCCAGCGAAGA 47177 Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740 | |||| ||| ||||| ||||| ||||||||||| || || ||||| || || || || | Sbjct 47178 TGAGTCGTTGCTGATCAGGAGGGATTCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTAT 47237 Query 82741 CAATCGTATC 82750 | || || || Sbjct 47238 CGATGGTGTC 47247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981807839901721