Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mrakia_20frigida_20[genbank_20GCA_5F000815965.1_202015-01-07] 1,539 sequences; 28,651,359 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq712 100 4e-15 >seq712 Length=12724 Score = 100 bits (110), Expect = 4e-15 Identities = 118/156 (76%), Gaps = 9/156 (6%) Strand=Plus/Plus Query 1456125 AAAGGCCGACTGGGCGATGAAGTGGATCAA---CAAGGAGGGCCTCGACACTTTGCCGAG 1456181 ||||||||| ||||| | ||||||||| ||||||| || || ||| || ||| Sbjct 5962 AAAGGCCGATTGGGCTCTCAAGTGGATCTCGTCCAAGGAG----TCCAC-CTTCGCTGAG 6016 Query 1456182 CGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATC 1456240 || ||||||| ||| |||| |||||||| ||||| ||||| || ||| ||||| Sbjct 6017 CGACTCGTCGCCTTCTCCGCCGTCGAGGGAATCTTCTTCTCTGGATCGTTCGCTTCCATC 6076 Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTT 1456276 || |||||||||||||| || || |||||||| ||| Sbjct 6077 TTCTGGCTCAAGAAGCGAGGACTAATGCCCGGACTT 6112 Score = 87.8 bits (96), Expect = 3e-11 Identities = 103/137 (75%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 1456605 CTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGG 1456664 ||||||||||||||||| | | || |||||||| || || |||| ||||||| | | Sbjct 6494 CTCATGTGCCAGTACATCG-AGTTCGTCGCCGATCGACTCCTCGTCTCGCTCGGAAAC-G 6551 Query 1456665 AGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCA 1456724 ||||||||| | | ||||||| ||| | |||||| |||||||||| |||| | Sbjct 6552 AGAAGCACTGGGGATCTTCCAACCCCTTCGACTTCATGGAGATGATCTCGCTTCAGGGGA 6611 Query 1456725 AGACCAACTTTTTCGAG 1456741 | ||||||| |||||| Sbjct 6612 AAGCCAACTTCTTCGAG 6628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177662760621318